| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2073 |
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| Symbol | |
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| ID | 5747634 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2268504 |
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| End bp | 2269595 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641297155 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_001563098 |
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| Protein GI | 160897516 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.10677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.723957 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAC ACCGTCGCCA CCCACTTGCA CCAGGAGCCC CAGCCATGAA CCTCACCAAG
ATTCTTGCCG GACTGCTGGT GGGGCTGGCC ATCGTGCTCG CAGGCCTTGC CTGGCTGCTG
GGCAGCCAGC CCGCACGCCC CGTGGCCCAG CCCTCGCCGG CCGCCTCGGC GCAGCCGGCC
CCCGAGCCCG TGCCGCAGCA TGCCGTCGTG GTCGTGGCCC AGGCCATTGC CGCAGGCCAG
CGCATCGGCA GCGAGGATGT GAAGCTGGCC CAGCTGCCCG CCCCCGTACC CGGCAGCTTT
GCCGCGACCG ACGACGTGCT GGGCCGCACC ACGCTGATGG CGCTCACCCC GGGCACCCCG
CTGTTCGAGC AGCAACTGCT CAGCGGCCTG GCGCTGCAGC TGGAGCCGGG ACAGCGCGCC
CTGGCGATCG CCATCCGGGA GCAGATGGCC GCGGGCCACC ATGTGCGCCC CGGCGACTTC
GTGGATGTCT ACTTCACGCT GGACGGCAAG TCCGACCAGG CACCCGTGGA CGCGCAGACC
CGGCTGCTGC TGGCGCGCAG CCGCGTGCTG GCCTACGGCT CCGGCAGCGT GGAACGCCCA
CCCATGCCGG CCGTCCAGCG CCAGGCGCAG CAGGACAAGG AATCGGCAGG CTCGTCGCTG
CGCCGCGCCA GCGCTGCGGA TCAGACGGGC CAGCGCCCTG AGAACGTGCA ATCGGCCGTG
CTGGCCGTGC CGCTGGACGA TGTGGAGCGC CTCACGCTGG CCGAGAAATT CGGCCAGCTC
ACCCTGGCGC TGCGCAACCC GGACGACCTG TCCGTGCCCG ATCCCAAGCT CTTCGCCGCC
CTGCCCGGCG CACTGCAGCC GGTGGCGGGC CGCCTCAGGA AAGACCAGGC ACTGGAAGGA
GCCGACCGCG CCTTCGCCGG CCTGCGCATG CAGGACCTGG CCACCGGCGC CGACGCCAGG
AACATCCGCA AGCCTGCCGC CCAGCCCATG ACGGCCTTCG CCCCCGCCGT GCGGCCGCCG
CAGCAGCGGG CCCCGCGCGA ACGCACCGTG GAGCTGCACA ACGGAGCCGC GGTGCAGATG
GTGAACTACT GA
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| Protein sequence | MPEHRRHPLA PGAPAMNLTK ILAGLLVGLA IVLAGLAWLL GSQPARPVAQ PSPAASAQPA
PEPVPQHAVV VVAQAIAAGQ RIGSEDVKLA QLPAPVPGSF AATDDVLGRT TLMALTPGTP
LFEQQLLSGL ALQLEPGQRA LAIAIREQMA AGHHVRPGDF VDVYFTLDGK SDQAPVDAQT
RLLLARSRVL AYGSGSVERP PMPAVQRQAQ QDKESAGSSL RRASAADQTG QRPENVQSAV
LAVPLDDVER LTLAEKFGQL TLALRNPDDL SVPDPKLFAA LPGALQPVAG RLRKDQALEG
ADRAFAGLRM QDLATGADAR NIRKPAAQPM TAFAPAVRPP QQRAPRERTV ELHNGAAVQM
VNY
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