| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2067 |
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| Symbol | |
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| ID | 5747628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2261093 |
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| End bp | 2262124 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641297149 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001563092 |
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| Protein GI | 160897510 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.457723 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.512607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACACC AGGAAAACAC CCGCGCAGGG CGGACGCCAG CGCCGGCACC CCTTGCAACC
CTGGCAGCCC TGGCGACCCT GGCCCTGGCC CTGGCCGGCT GCGCCAGCAA GGGGCCGCAG
GGCTACGGCG CCCCTTCCGC GCAGCAGGAA ACCGCCGCCC AGGCTCAGCA GCAATTGCAG
AACGCCCAGC AGGCCACCCA GGTGGACAAC GCCCAGACCT ATCTGGACCT GATCACGCAG
ATGCAGCAGG CGGGCCAGTG GTATGCCTCG CTGGCGCACA CCGAAGCCTT CGAGCAGCAG
TACGGCGTGA ACCCGGAGTC GCGCCTGATG CGGGCCGACG CGCTGCGCAA CACCGGCCAG
GTCGAGCAGG CCCGCCAGGC CTACCTGGCG CTGCTGCAGG GCGCCACCAC GGCGCGGGCG
CGGCGCGGCC TGGGCCTGCT GTACGCAAGC CAGGGCCAGT ATGGCCAGGC CGTGGAGCAG
CTGGACAAGG CGCGCCAGCT CAACCCCATC GACGCCAACG TGCTCAGTGA CCTGGCCTAC
GCCCACATGC TCGACGGCCG GCTGGCCGCC GCGCAGATGC CCATCATGCA GGCCTCGCAA
CTGGCCCCGG CCAACGCGCG GGTGCAGCTG AACATGGCGC TGTTCTGGCT GGCCAGCGGC
AACCAGGCTC AGGCGTCGCA GCTGCTGCGC CAGCTGGCCC AGCCCCAGGC CAAGGGCGCC
CTGCCCATGA TCGACCAGAC CTCGCTGCAG ACCCTGCAGG CACAGCTGGC CAGCGTGCGC
GATGCCGTGC GCCTGCGCGG CGACAGCCTG CCCGCCGAGG CCGGTGCCGC TGTGTCCAGC
GCCCCTGTGC TGCCTTCTGT GCCGCCTTCT GCGCTGCCCC CTGCACTACC CCCTGTGCCG
ACCCTGGGCA CCCGCCCCGA AGCACGCGCC ACCGAGGCCC TGCCCGAGAC CCTGCCGGCC
GGCATCACCC GGCGCATTCT TCTTTCCGAG CCGCCCGGCG CCGCAGGCGC AGCACCGGCC
TCGCCACTTT GA
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| Protein sequence | MRHQENTRAG RTPAPAPLAT LAALATLALA LAGCASKGPQ GYGAPSAQQE TAAQAQQQLQ
NAQQATQVDN AQTYLDLITQ MQQAGQWYAS LAHTEAFEQQ YGVNPESRLM RADALRNTGQ
VEQARQAYLA LLQGATTARA RRGLGLLYAS QGQYGQAVEQ LDKARQLNPI DANVLSDLAY
AHMLDGRLAA AQMPIMQASQ LAPANARVQL NMALFWLASG NQAQASQLLR QLAQPQAKGA
LPMIDQTSLQ TLQAQLASVR DAVRLRGDSL PAEAGAAVSS APVLPSVPPS ALPPALPPVP
TLGTRPEARA TEALPETLPA GITRRILLSE PPGAAGAAPA SPL
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