| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2062 |
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| Symbol | |
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| ID | 5747623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2255804 |
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| End bp | 2257198 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641297144 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001563087 |
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| Protein GI | 160897505 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.767167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.704924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCTGG ACGAGCTCGT CATCTATGTC TGGGAAGGCC AGGCCGACAT CGCCGAGCGG
GTGGAGCGCT GCGTGCTCAA CCTGGGCGTG GACGTGGTGC GCGCCGACGG GCTGGCCCTG
CCCGCCGACA CCAGCGAGCT GGGCAATGCG ATCGCCGTGG TCAGCGTCTC GGTGCTGGAG
GGCGCGCGCT TCACGCGCCA GGGCGTGGAG GGCACCTTCG GCATGCCCGT GCTGTGGGTC
AGCGCCAAGC AGCGCGACGC CAACGCCGGC ACCTATGCCA TGGAGTACTC GCATGTGCTG
CCCTTCGACT TCACGGGGGC CGAGCTGCGC GCCATGCTGG TGCGCATCCT GCGGCGCATG
CAGAGCAACC AGCGCCAGGT GCAGCGCTCG GAGGACATCA TCGCCGTGGC CGACTGCATG
CAGCGCCTGC TGCGCGACGT GGACACCTTT GCCGACTGCG AGCACAGCGT GCTCATCATC
GGCGAGACCG GCGTGGGCAA GGAACGCATT GCCGAGCGGC TGCACGAGCG CAACAACCGC
TACGGCCAGG GCCCCTTCGT GGTGGTCAAC TGCGGCGCCA TCCCGGACGG GCTGTTCGAG
TCCCTGTTCT TCGGCCATGC CAAGGGCTCG TTCACGGGCG CGGTGAATGC CCACAAGGGC
TATCTGGAGC AGGCCAACGG CGGCACGCTG TTCCTGGACG AGATCGCGGA CCTGCCGCTG
TACCAGCAGG TCAAGCTGCT GCGCGTGCTG GAAGAGCGCG CCATCACGCG GCTGGGCTCG
GCCGCCGCCG TGCGGCTGGA TTTCCGGCTG GTGGCGGCCA CCAACAAGCC GCTGCGCGGG
CTGGTGCGCG AGGGGCGCTT CCGGGCCGAC CTGTTCTTCC GCCTGGCCGT GATCGAGCTG
CAGATCCCCA GCCTGGAGGA GCGCGGCGAG GCCGACAAGC TGGCCATCTT CCACGCCATC
CTGCACAAGG TGGTGGGCGA GGCCACGATG AAGGAGCTGG GCGAGCCGCC CTTCTTCATC
CTCGACGCCG TGGCCCAGAT GTACTTCCCC GGCAATGTGC GCGAGCTGCG CAACCTGGCC
GAGCGCATCG GCGTGGCCGC CCGCCAGACG CGCGACTGGA ACGCCGACGG CGCCACGCAG
CGCATCCTGC AGCACGCCCA GGCCCTGTCG GCCACCACCT TCCCGCCGGA CGCCGGCGCC
GCCGAGCCCC TGCTGGCCGA CCGCAGCAAC TGGGACATGG ACGAGCGCAA CCGCATCATC
GCGGCGCTCA ACACCAACGA CTGGAAGCGC CAGAACACGG CCCAGCACCT GGGCATCAGC
CGCAAGGTGC TCTGGGAAAA GATGCGCAAG TACCAGATCA GCGACGGCGA GCCCGAAGTG
CCCGTGCCGG GCTGA
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| Protein sequence | MNLDELVIYV WEGQADIAER VERCVLNLGV DVVRADGLAL PADTSELGNA IAVVSVSVLE
GARFTRQGVE GTFGMPVLWV SAKQRDANAG TYAMEYSHVL PFDFTGAELR AMLVRILRRM
QSNQRQVQRS EDIIAVADCM QRLLRDVDTF ADCEHSVLII GETGVGKERI AERLHERNNR
YGQGPFVVVN CGAIPDGLFE SLFFGHAKGS FTGAVNAHKG YLEQANGGTL FLDEIADLPL
YQQVKLLRVL EERAITRLGS AAAVRLDFRL VAATNKPLRG LVREGRFRAD LFFRLAVIEL
QIPSLEERGE ADKLAIFHAI LHKVVGEATM KELGEPPFFI LDAVAQMYFP GNVRELRNLA
ERIGVAARQT RDWNADGATQ RILQHAQALS ATTFPPDAGA AEPLLADRSN WDMDERNRII
AALNTNDWKR QNTAQHLGIS RKVLWEKMRK YQISDGEPEV PVPG
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