Gene Daci_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2053 
Symbol 
ID5747614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2245718 
End bp2246683 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content68% 
IMG OID641297135 
ProductDNA/RNA non-specific endonuclease 
Protein accessionYP_001563078 
Protein GI160897496 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1864] DNA/RNA endonuclease G, NUC1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTCA AGAACAAGAA GCCTTCCGCG CGCAAGCGCA GTTCCTCCCC CGCCTCCAAG 
AAGAAAGCCT CCAGCCGCAG CGGACTGTGG CGCTCCATGC TCGCCGCCCT TGTGGCGGCA
GCGGGCACCT TCCAGATCGC CAGTTGCAGC CTGGACCCGA ACTGGCACCC CAAGCTTCCC
GAGCCGCCCT TCCTGTCCAC CCTGCCCATC CCGGGGCTGG AGCACCTGCG CAAGCAGCCG
GAGACAGGTT CGGGCACGGC CTCCGGTGGC GGCAGCCCGC CTGCCGGCAG CATGGCCACG
GGCTTTTCGC ACTGCCGCGA TTTCTTCCCC GGTGGCGAGC CCCCTGCCCT GCAGATCCAG
CCCCAGCAGC GCGAGCTGTG CTTCAGCGCC TTCGCCGTGC TGCACAGCGG CCAGACCAAG
ACGCCCGTCT TCGTGGTGGA GCGCCTGAAC CGCAAACTGC TGGACCAGGG CCAGGGCCTC
AAGCGCAGCG ACAAGTTCTA TGCCGATGCC CGCCTGCCCC GCGCCGAGCG CGCCGAACTG
GACGACTACC GCCGCTCCGG CTACTCGCGC GGCCACATGG CGCCGGCCGG CGATATGTAC
TCGCCCGAGG CCATGGCCCA GAGCTTCAGC CTGGCCAACA TGGTTCCGCA GGACCAGACC
CACAACGGCG GCGTCTGGAG CAAGGTCGAG CAGGACACGC GCCGCTACGC CCAGCGCGCC
CAGGGCGATG TCTATGTGTT CACCGGCCCG GTGTTCGACG GCCAGCCGCT CACCATCGGG
CCGGGCAAGG TCCATGTGCC CAGCCATATC TTCAAGCTGG TCTACGACGC CAGCACGGGG
CGTGCCTGGG CGCACTGGCA GGCCAACAGC CCGGATACGC GGATGAGTGC GCCGATCAGT
TATGAGGAGT TCACTCGGAG GACGGGGATG CCGTTGTTGG CGGGGGTGAT GAGGGGGCGG
GGTTAG
 
Protein sequence
MTVKNKKPSA RKRSSSPASK KKASSRSGLW RSMLAALVAA AGTFQIASCS LDPNWHPKLP 
EPPFLSTLPI PGLEHLRKQP ETGSGTASGG GSPPAGSMAT GFSHCRDFFP GGEPPALQIQ
PQQRELCFSA FAVLHSGQTK TPVFVVERLN RKLLDQGQGL KRSDKFYADA RLPRAERAEL
DDYRRSGYSR GHMAPAGDMY SPEAMAQSFS LANMVPQDQT HNGGVWSKVE QDTRRYAQRA
QGDVYVFTGP VFDGQPLTIG PGKVHVPSHI FKLVYDASTG RAWAHWQANS PDTRMSAPIS
YEEFTRRTGM PLLAGVMRGR G