Gene Daci_2029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2029 
Symbol 
ID5747590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2220800 
End bp2221708 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID641297111 
Producthypothetical protein 
Protein accessionYP_001563054 
Protein GI160897472 
COG category[S] Function unknown 
COG ID[COG1561] Uncharacterized stress-induced protein 
TIGRFAM ID[TIGR00255] conserved hypothetical protein TIGR00255 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.978666 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTTT ACAGCATGAC CGGATACGCC AGTGCCCAGC ACGGCGCGTC CGCAGAAGAT 
GGTGGAGCGT CGGGCCGCAA CAGCCGGCTC GGTCTGGAGA TCCGCTCGGT CAACAGCCGC
TTCCTGGATC TTTCGTTCCG CCTGCCCGAC GAGTTGCGCG CCCATGAGCC GGCCCTGCGG
GCCCTTCTGA CCGCCCGCCT CAAGCGCGGC AAGGTCGAAG TGCGCGCCGC CATCGACAAC
GACGACGGCA ACTCCCTGCC CGACCCCTCC ACCGCCATGC TGCAGCGCCT GGCCATGCTC
CAGGACACCG TCCAGTCATG GCTGCCCGAC GCTCGCAGCC TGTCCGTCTC CGACGCACTG
CGCCTGGCCA GCGGCGGCGC TAACTCGGCC ATCGACTGGA GCAGCGTGCT GCCCACGCTG
GCAGAGCAGG CCCTGACCGA ACTGCTGGAA GCCCGCGCCC GCGAAGGCAA GCGCCTGGCC
ACCATGCTGC TGGACCGCAT CGCCCAGTTG CGCAAGCTCG CGGCAGACGC CACGCCCCTG
GTGCCCCAGC TTGTGGAGCA GCAGCGCCTG CGCTTCATGG AGCGCTGGAA GGATGCGATG
GCCCTGGCCG AAGGCGCCGT GGCGCCCGAA GCCGCCCAGG ACCGCGCCCT GACCGAGGCC
ACGGCCTTTG CCATCCGCAT CGACGTGGCG GAAGAAGTCA CCCGCCTGGA CTCGCACCTG
GACGAGATCC AGAGCCTGCT CAAGAAGGGC GGCGAGATCG GCAAGCGCCT GGATTTCCTG
ATCCAGGAAC TGCACCGCGA AGCCAACACG CTGGGCTCCA AGTCCGCCAC GCTGGAGCTG
ACCCGCATCA GCGTGGACAT GAAGGTGCTG ATCGAGCAGA TGCGCGAGCA GGTGCAGAAC
ATCGAATAA
 
Protein sequence
MPVYSMTGYA SAQHGASAED GGASGRNSRL GLEIRSVNSR FLDLSFRLPD ELRAHEPALR 
ALLTARLKRG KVEVRAAIDN DDGNSLPDPS TAMLQRLAML QDTVQSWLPD ARSLSVSDAL
RLASGGANSA IDWSSVLPTL AEQALTELLE ARAREGKRLA TMLLDRIAQL RKLAADATPL
VPQLVEQQRL RFMERWKDAM ALAEGAVAPE AAQDRALTEA TAFAIRIDVA EEVTRLDSHL
DEIQSLLKKG GEIGKRLDFL IQELHREANT LGSKSATLEL TRISVDMKVL IEQMREQVQN
IE