Gene Daci_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2027 
Symbol 
ID5747588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2219904 
End bp2220107 
Gene Length204 bp 
Protein Length67 aa 
Translation table11 
GC content63% 
IMG OID641297109 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_001563052 
Protein GI160897470 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.269259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA TCACTGTTGA AGACTGCCTG GAGCAGATCC CTAACCGCTT CCAGCTCGTG 
TTGGCCGCCA CCTACCGCGC CCGCATGCTG AGCCAGGGCC ACACGCCCAG GATCGAAACC
AAGAACAAGC CCGGTGTCAC CGCCCTGCGC GAGATCGCCG AAGGCAAGGT CGGCCTGGAG
ATGCTGAAGA AGGTTCCGGG CTGA
 
Protein sequence
MARITVEDCL EQIPNRFQLV LAATYRARML SQGHTPRIET KNKPGVTALR EIAEGKVGLE 
MLKKVPG