| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2026 |
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| Symbol | |
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| ID | 5747587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2217535 |
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| End bp | 2219802 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297108 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_001563051 |
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| Protein GI | 160897469 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.40786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGG CCTTGACTTC GTTCACAGCC CCCTCTGATC CCGTACCGAC ACCCCGGCCC
GAGCGCATGT CTGCAGAGCA GGCAGCGAGC GTGTCGGCCA ATGCCTTTGC CGGACTGATG
GAGCACCTGG GTTACCTGGA TGCCACCAGC ATCGAGCAGG TGCGCGAAGC CTATGCCTTT
GCCGACCTGG CCCACAGCGA CCAGTGGCGC AGCAGCGGCG AACCCTACAT CACCCACCCC
ATTGCCGTCA CCGCGCTGTG CGCGAGCTGG AAGCTCGACG CCCCGGCCCT GATGGCCGCG
CTGCTGCACG ATGCGATGGA AGACTGCGGC GTCACCAAGG CGGACCTCGC CCAGCGCTTC
GGCCAGGACG TGGCCGAGCT GGTCGACGGC CTCACCAAGC TGGACAAGCT GCAGTTCAAC
ACGCGTGAGG AAAACCAGGC CGAGTCCTTC CGCAAGATGC TTCTGGCCAT GGCGCGCGAT
GTGCGCGTCA TCCTGATCAA GCTGGCCGAC CGCACCCACA ACATGCGCAC CATGGGCGAC
ATGCCGCGCA ACAAGTGGGG CCGCATCTCG TCGGAGACGC TGGAGATCTA CGCACCCATC
GCCCACCGCC TGGGCCTGAA CCAGACCTAC CGCGAGCTGC AGGACCTGGC CTTCCGCCAC
CTGCATCCCT GGCGCTATGC CACGCTGGAA AAGGCCATCG CCCGCTCGCG CAAGCGCCGC
CGCGACCTGG TCCAGCGCGT GCAGGACGAG GTCAATGCGG AGTTCGCCGG CGCAGGCCTG
CAGGCACGCC TGGCCGGGCG CGAAAGCACG CTGTATTCGC TCTATCTGCG CATGGAGAAG
AACCAGCTGA GCTTTGCCAA GGTGACGGAC GTCTACGGGT TTCGCGTCAT CCTGCCGCGC
GTGATCGACT GCTACACCGC GCTGGGCGTG CTGCACCAGA TGTACAAGCC CATGCCGGGC
CGCTTCAAGG ACTACATCGC CATTGCCAAG AACAATGGCT ACCAGTCGCT GCACACCACA
CTGGTGGGCC CCTCGGGCGT GAACATCGAG TTCCAGATCC GCACCGAGGA AATGCACATC
GTCGCCGAAG CCGGCGTCGC CGCGCACTGG CTGTACAAGG CCCAGCCCGG CCACGATTCC
GAGCAGCTGG GCACGCAGTG GCTGCAGTCG CTGCTGGACA TACAGAACGA GACGCGCGAT
GCCGCCGAGT TCTGGGACCA CGTCAAGGTG GACCTGTTCC CCGACGCCGT CTACGTGTTC
ACGCCCAAGA GCGAGATCAT GGCCATGCCG CGCGGCGCCA CCGTGGTGGA CTTCGCCTAC
GCCATCCACA GCAAGGTCGG CAACCACATG ACGGCCGCGC GCATCAACAA CGAGGAAGTG
CCGCTGCGCA CAGAACTCAA GAGCGGCGAC GTGGTGCAGA TCGTCACCTC CGAGGACGCC
ACGCCCAACC CGGCCTGGCT GGGCTTCGTG AAGACGGGCC GCGCGCGCTC CAAGATCCGC
CACTACCTGA AGTCGGCCGC GCAAAGCGAA TCGGCCCGCC TGGGCGAGAA CCTGCTGGCC
CAGGCCATGC GTGCCGAAGG CATGGATGCC GTGCCGCCGG CCGACGAGGC CAACCAGGCA
CTGTGGGACG AGGTGCTGCG CATGGCCGGC AGCCGCAGCC GCGCCGACCT GATGGTGGAC
ATCGGCATGG GCCGGCGCAT TGCGTCGCTG GTGGCCTCGC GCCTGACGGC GCTGATGGCG
CGCCACGGCC ACCGGCCCGA CGCCCTGCTG CTCACACGCG AACGCTTCAA CTCCAGCAAC
CGCCCCTTCC AGGGTGCCGT GCTGCTGGAC GGCTCCAACC AGGGCTCCAT CCACTACGCG
CAATGCTGCC GCCCCGTGCC GGGCGACCCC ATCGTGGGCT ACCTGGGCAG CGGCGAAGGC
CTGATCGTCC ACCATGCGCA GTGCAAGATC GCGCAGCGCC TGCAGGAAAA GGACAGGGAC
CGCTTCATCG TGGTCGAGTG GGCCGATGAC ATGGATGCCG CGCGCCTGTT CGAGGCACGC
ATCGTGGTCA CCGTCAACAA CGGCAAGGGC GTGCTCGCGC GCGTGGCGGC CGAGCTTGCC
GGCGCCGAGG TGGACATCCT GCGCGTGGAC ATGGCCGACG AGGCTGCCAT GAGCACCACG
GACCTGTGCT TCGTGATCTC GGTGCACGAC AACCAGCAGG TGGAGTCCGC GCTGCGCAAC
CTGCGCCGCG TGCACTCGGT GGTGCGCGCA TCGCGCGTCA TCCCCTGA
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| Protein sequence | MKAALTSFTA PSDPVPTPRP ERMSAEQAAS VSANAFAGLM EHLGYLDATS IEQVREAYAF
ADLAHSDQWR SSGEPYITHP IAVTALCASW KLDAPALMAA LLHDAMEDCG VTKADLAQRF
GQDVAELVDG LTKLDKLQFN TREENQAESF RKMLLAMARD VRVILIKLAD RTHNMRTMGD
MPRNKWGRIS SETLEIYAPI AHRLGLNQTY RELQDLAFRH LHPWRYATLE KAIARSRKRR
RDLVQRVQDE VNAEFAGAGL QARLAGREST LYSLYLRMEK NQLSFAKVTD VYGFRVILPR
VIDCYTALGV LHQMYKPMPG RFKDYIAIAK NNGYQSLHTT LVGPSGVNIE FQIRTEEMHI
VAEAGVAAHW LYKAQPGHDS EQLGTQWLQS LLDIQNETRD AAEFWDHVKV DLFPDAVYVF
TPKSEIMAMP RGATVVDFAY AIHSKVGNHM TAARINNEEV PLRTELKSGD VVQIVTSEDA
TPNPAWLGFV KTGRARSKIR HYLKSAAQSE SARLGENLLA QAMRAEGMDA VPPADEANQA
LWDEVLRMAG SRSRADLMVD IGMGRRIASL VASRLTALMA RHGHRPDALL LTRERFNSSN
RPFQGAVLLD GSNQGSIHYA QCCRPVPGDP IVGYLGSGEG LIVHHAQCKI AQRLQEKDRD
RFIVVEWADD MDAARLFEAR IVVTVNNGKG VLARVAAELA GAEVDILRVD MADEAAMSTT
DLCFVISVHD NQQVESALRN LRRVHSVVRA SRVIP
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