| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2022 |
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| Symbol | |
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| ID | 5747581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2212457 |
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| End bp | 2213986 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641297102 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001563047 |
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| Protein GI | 160897465 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.190123 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA AGCGCGCGGC CACGCAGCCG CAACCGCCCG AGGGCGCCAT GTGGGGGCAG
CTGTTTCGCC GCAGCGCCCG CCCCTCCCTG AGCCTGCAGG GCCAGATCCG CGAGATGCTG
GTCGATGCCA TCCTCTCGGG CATCCTCGCA CCCGGCGAAT CCATTCCCTC CAGCCGCGAG
CTGGCGCGCC ACCTGGGCGT GGCACGCATC ACCGTGGTGC TGGCCTACCA GCAACTGGCC
GAGGAAGCCT TTTTGCTGAG CCGCCAGCGC AAGGGCCACT TCATCCATCC CGACGTACTC
AAGGGGCGCA CGCCAGGCGG CGCTGCGGCC AGCAGCCCCC CTGGCGAAGG CCGCCGCACC
GACTGGTCGC GGCGCCTGTG GCTGCTGCCC AGCCAGCAGC GCAGCATCGT CAAGGAAGAG
GACTGGCAGC GCTACCCCTA TCCCTTCCTG TACGGCCAGT TCGACAAGGA GCTGTTTCCC
ACGGCCGCCT GGCGCGAATG CTGCCTCAAG GCCCTGGGCG TGCTGGACAT ACGCCAGTGG
GCGCCCGACC AGATCGCGCG CGACGACGAG ATGCTGATCC AGCAGGTGCA GACCAAGATC
CTGCCGCGCC GCGGCGTCTG GGCCTCGGCC GACGAGCTGA TCATCACCGT GGGTGCGCAG
CACGCCCTCT ACATGGTGGC CGACCTGCTG ATGCGCGAGG GCACGGCCGT GGGCATCGAG
GAGCCCGGCT ACCCCGACGC GCGCAACATC TTCAGCAGTC GAACCTCCCA GGTCATCCCG
CTGCCGGTGG ACGGCCAGGG TCTGCCGGTC ACGCCGCTGC TGCGCCAGCT CGACTACCTC
TACGTGACGC CCAGCCACCA ATGCCCCACG GGCGTGACCA TGCCGCTGGC GCGGCGCGAG
GCGCTGCTGG AGATGGCCGA GGCGCACGAC ATCATCCTCA TCGAGGACGA CTACGAGAGC
GAGAGCAGCT TCGACGGCCA GCCCATTCCG GCGCTCAAGA GCCTGGACCG CAGCAACCGC
GTGATCTACG TGGGCAGCCT GTCCAAGAGC CTGGCGCCGG GCCTGCGCGT GGGCTACATC
GTGGCTGCGC CCGAGCTGAT CCGCGAACTG CGCGCGCTGC GCCGGCTCAT GATCCGCCAC
CCCGCCACCT TCGTGCAGCG CACGCTGGCC ATGTTCATCT CCCTGGGCCA TTACGAGGCC
CAGCAGCGGC GCCTGGCCCA GGCGCAGAAG GAGCGGCACG CGGCGCTGAC GGCCGCCATG
GCCGAGCATG CCCCCGGCTG CCGCATCACG CCCGTGCGCG GCGGCGGCTC GTGCTGGGTG
CAGTTGCCCG ACAACATGCC TGTGCAGGCC CTGGCGCAGC GCGCCGCAGC GCATGGCGTG
CTCATCGAGC CCGGCGATGT GTTCTTCGCC CGCCCGGGCA CGCCCGGCAG CTTCATGCGC
ATGGGCTACC AATCCATACC CGCCAACGAC ATCGGCCAGG GCGTGAAGGC CCTGGCCGAT
GCGATCCGTG AGGAGCAGCC CGAGAAGTAA
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| Protein sequence | MTDKRAATQP QPPEGAMWGQ LFRRSARPSL SLQGQIREML VDAILSGILA PGESIPSSRE
LARHLGVARI TVVLAYQQLA EEAFLLSRQR KGHFIHPDVL KGRTPGGAAA SSPPGEGRRT
DWSRRLWLLP SQQRSIVKEE DWQRYPYPFL YGQFDKELFP TAAWRECCLK ALGVLDIRQW
APDQIARDDE MLIQQVQTKI LPRRGVWASA DELIITVGAQ HALYMVADLL MREGTAVGIE
EPGYPDARNI FSSRTSQVIP LPVDGQGLPV TPLLRQLDYL YVTPSHQCPT GVTMPLARRE
ALLEMAEAHD IILIEDDYES ESSFDGQPIP ALKSLDRSNR VIYVGSLSKS LAPGLRVGYI
VAAPELIREL RALRRLMIRH PATFVQRTLA MFISLGHYEA QQRRLAQAQK ERHAALTAAM
AEHAPGCRIT PVRGGGSCWV QLPDNMPVQA LAQRAAAHGV LIEPGDVFFA RPGTPGSFMR
MGYQSIPAND IGQGVKALAD AIREEQPEK
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