| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_2021 |
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| Symbol | |
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| ID | 5747580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2210967 |
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| End bp | 2212409 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641297101 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001563046 |
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| Protein GI | 160897464 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.888846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGAC ATCAGCAAGC CTCTTCGCCG GGGCTTTCAC ACGGGCTCAA ACAGCGGCAC
ATGACCATGA TCGCCCTGGG CGGCGTCATC GGCGCCGGGC TGTTCGTGGG CAGCGGCGTG
GTCATCAAGT CGGCCGGGCC GGCCGCGATT CTTTCCTTCC TCATCACGGG CCTGCTCGTG
GTGCTGGTCA TGCGCATGCT GGGCGAGCTG GCCTGCTCCA TGCCCGGCGG AGGGTCCTTC
TACGAATATG CGCGAGAGGC CTGGCGCGAC CGCCCCGGCG TGGGCCGGCT GGCAGGCTTT
CTGACGGGCT GGATGTACTG GTACTTCTGG GTCATCGTCG TGGCGCTGGA GGCCGTGGCC
GGTGCCGACC TGGTGCGCTA CTGGCTGCCC GATGTCCCCA ACTGGAGCAT CAGCCTGGTG
CTGCTGGTGA TGCTGACGCT GACCAACCTG GTCTCGGTGA AGTCCTTTGG CGAGTTCGAA
TTCTGGTTCG CCTCCATCAA GGTGGCGGCC ATCGTGGTCT TCCTGTTCGT GGCCGGCGTC
TACGTGCTGG GCCTGACGCC TGCGTCGCAG GGCATGCACT TCGGCAACCT CACCGGCAAT
GGCGGCTTCA TGCCCAACGG CATCGTGCCG GTGCTGACCG GGGCCGTGGC GGCCACGGGC
TTTTACTTCG GCGCCGAAAT CGTGACCATT GCGGCGGCTG AAACGGCCGA GCCGCAGAAG
GCCGTGGCCA AGGCCACCAG CTCGGTGATC ACGCGCGTGC TGGTGTTCTA TGTGGGCTCC
ATCTTCCTGG TGGCCTGCCT GGTGCCCTGG AATGCGGTTG GCATCGCCAC GCCGTATGTG
AGCGCACTGA ACACCATGGG CGTGCCGGCT GCCGCGCAGA TCATGAACGC CATCGTGCTG
ACGGCCGTGC TGTCGGCGCT GAACTCGGGG CTGTATGCAT CCTCGCGCAT GCTGTTCGCG
CTGACGCGGC GCGGCGATGC GCCCCAGGCG CTGGCCAAGG TCAGCCGCAA CGGCGTGCCC
ACGCGCGCCA TCCTGGTGGC CACGGTGTTC GGCTACGGCG CCGTGGTGAT GTCCTATGTG
TCGCCCGACA AGGTGTTCGC CTTCCTGGTC AATTCCTACG GCACGGTGGC GATCTTCGTC
TACATCCTGA TCGCCATCTC GCAGCTGCGC CTGCGCTCCC GCCTGGAGCG CGAGGCGCCG
CACCTGCTCA AGGTGCGCAT GTGGTGCTAT CCGTACCTGA CCTGGTTCGC CATCTTCGGC
ATGCTGTCCA TCGTCATCGC CATGGCCTTC ATCCCCGAGC AGCGCACACC GCTGGCGCTG
GGCGTGGCCA GCCTGTGCAT CCTGCTGCTG GCCTATGGCG TGCGGCAGTT CCTGCAGCGT
GGCGTGGCGC CGGTGGTGTC CTCGCTGTCC GAGGCCGCGC AGCCCGAGCC GCAGAAGTAC
TGA
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| Protein sequence | MIGHQQASSP GLSHGLKQRH MTMIALGGVI GAGLFVGSGV VIKSAGPAAI LSFLITGLLV
VLVMRMLGEL ACSMPGGGSF YEYAREAWRD RPGVGRLAGF LTGWMYWYFW VIVVALEAVA
GADLVRYWLP DVPNWSISLV LLVMLTLTNL VSVKSFGEFE FWFASIKVAA IVVFLFVAGV
YVLGLTPASQ GMHFGNLTGN GGFMPNGIVP VLTGAVAATG FYFGAEIVTI AAAETAEPQK
AVAKATSSVI TRVLVFYVGS IFLVACLVPW NAVGIATPYV SALNTMGVPA AAQIMNAIVL
TAVLSALNSG LYASSRMLFA LTRRGDAPQA LAKVSRNGVP TRAILVATVF GYGAVVMSYV
SPDKVFAFLV NSYGTVAIFV YILIAISQLR LRSRLEREAP HLLKVRMWCY PYLTWFAIFG
MLSIVIAMAF IPEQRTPLAL GVASLCILLL AYGVRQFLQR GVAPVVSSLS EAAQPEPQKY
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