Gene Daci_2020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2020 
Symbol 
ID5747579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2210444 
End bp2210842 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content68% 
IMG OID641297100 
Producthypothetical protein 
Protein accessionYP_001563045 
Protein GI160897463 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID[TIGR02096] conserved hypothetical protein, steroid delta-isomerase-related 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAG ACACCAACCC TCCGGATGCC CAGTTCCTGG CCCGCTTCGC CGAGGCCTGG 
AACCGCCACG ACATCGAGGC CCTGATGGGC TTCATGGCCG ATGAATGCGA GTTCCACGCC
GTGGCCGGGC CCGATCTCAT GGGCCGCAGC TTCGTCGGCC GCCAGGCGGT GCGCGAGGGC
TTCCAGATGG CCTGGCAGGC CTTCCCCGAT GCGGCCTGGC TCGATGGAGA CCATTTCGTG
CACGGCGACC GTGGCGTGTC CGAGAGCACC TTCAGGGGCA CCAAGGCCGA CGGCCTGCGC
GTGGAAGCGC GCATGGTGGA TGTCTTCACC TTCAAGGACG GAAAGATCGC CGTGAAGAAC
GCCTTCCGCA AGGACCGCCC GCCGGTGGCG GCCGCCTGA
 
Protein sequence
MSADTNPPDA QFLARFAEAW NRHDIEALMG FMADECEFHA VAGPDLMGRS FVGRQAVREG 
FQMAWQAFPD AAWLDGDHFV HGDRGVSEST FRGTKADGLR VEARMVDVFT FKDGKIAVKN
AFRKDRPPVA AA