Gene Daci_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2018 
Symbol 
ID5747577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2208205 
End bp2208606 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content66% 
IMG OID641297098 
Productglobin 
Protein accessionYP_001563043 
Protein GI160897461 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGG AATCCCAGAA CAACGCCCCC CAGACCCCCT ATGAATGGAT CGGCGGCGAG 
CCCAGGGTGC AGGCCCTGGT GGACCGTTTC TACGATCTCA TGGACCTGGA GCCCGGCTAT
GCCGAACTGC GTGCCGCCCA TGGCAGCACC CTGGCCGATG CGCGCCAGAA GCTGTTCTGG
TTCCTGTGCG GCTGGCTGGG CGGCCCCGAC CATTACCAGG ACCGCTTCGG CCACCCGCGC
CTGCGCATGC GCCACATGCC GTTTTCCATC GGCATCCTGG AACGCGACCA GTGGGTGGCC
TGCATGGACC AGGCCATGGG CGAGACCGGC GTGCCCGAGG ATTTGCGCGT GCGCCTCAAG
GCCAGCTTCA TGAACACGGC CGACTGGATG CGGAACCGGT AG
 
Protein sequence
MSEESQNNAP QTPYEWIGGE PRVQALVDRF YDLMDLEPGY AELRAAHGST LADARQKLFW 
FLCGWLGGPD HYQDRFGHPR LRMRHMPFSI GILERDQWVA CMDQAMGETG VPEDLRVRLK
ASFMNTADWM RNR