Gene Daci_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2012 
Symbol 
ID5747571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2198793 
End bp2199638 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content69% 
IMG OID641297092 
Producttaurine dioxygenase 
Protein accessionYP_001563037 
Protein GI160897455 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCC GACAGATCAC CCCCGCCATC GGCGCCGAAA TCTCCGGCGT CCATCTCGGC 
GATGCCGCAC GCGACGCCGC ACTGTTCGCG GACATCCGCG CCGCGCTGCT GACCCATCGC
GTGCTGTTCT TCCGGGACCA GGACATCACG CGCGCCGAAC ATGTGGCCTT TGCCAGCCGC
TTCGGCCCAC TGGAGGACCA TCCCGTGGCA GGCAGCGATC CCGAGCACCC TGGCCTGGTG
CGCATCTACC GCAGCGACGA TCCGCACAGC TACGAAAACA CCTGGCACTG CGATGGCCTG
TGGCGCCCCA ACCCGGCCAT GGGCGCGGTG CTGCGCTGCA TAGAGTGCCC GCCGATCGGC
GGCGACACCA TCTGGGTCAA CATGGTCAAG GCCTACGAGG AGCTGCCCGA GAGCATCAAG
CGCAGCATCG GCGGCCTGCG CGCCAAGGCC GGCATAGAGC ACACCTTCGG CGCCGTGATG
GCGCCCGAGG CGCGCGCGCG GCTGGCCAGC GAGCACCCGC CCGTGGAGCA TCCCGTGGTG
CGCACCCACC CCGAGACCGG CGAGAAGCTG CTGTTCGTGG GCGCGGGCTT CAGCACCCAC
TTCGTCAACT ACAGCACGCC CGAGAACGTG CGCCACGGCA TAGACAAGGC GCCCGGCGCC
GCGCTGCTGA TGAACTACCT GATCAGCCGC GCCACGATTC CCGAATACCA GGTGCGCTGG
TCCTGGAAGC CCGGCGACGT GGCCGTCTGG GACAACCGCA GCACCCAGCA CTACGCGCTC
AACGACTACT ACCCGGCGCC CCGCCGCATG GAGCGCGCGG GCATCGTCGG CGACATCCCG
CGCTGA
 
Protein sequence
MQIRQITPAI GAEISGVHLG DAARDAALFA DIRAALLTHR VLFFRDQDIT RAEHVAFASR 
FGPLEDHPVA GSDPEHPGLV RIYRSDDPHS YENTWHCDGL WRPNPAMGAV LRCIECPPIG
GDTIWVNMVK AYEELPESIK RSIGGLRAKA GIEHTFGAVM APEARARLAS EHPPVEHPVV
RTHPETGEKL LFVGAGFSTH FVNYSTPENV RHGIDKAPGA ALLMNYLISR ATIPEYQVRW
SWKPGDVAVW DNRSTQHYAL NDYYPAPRRM ERAGIVGDIP R