Gene Daci_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2006 
Symbol 
ID5747565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2192646 
End bp2193494 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID641297086 
Producttaurine dioxygenase 
Protein accessionYP_001563031 
Protein GI160897449 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2175] Probable taurine catabolism dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATAG AGCCCATGAC ATGCGCCATC GGCGCCGAAT TGCTCGGCGT GCGGCTGGCC 
GACGCGGTGC GCGACGACGC GCTTTTCTCG GAGATCCGGG CGGCGCTGCT GCGCCACAAG
GTGCTGTTCC TGCGCGACCA GGGCCTGACG CGCGCCGAGC ACGTGGCCTT TGCGCGGCGC
TTCGGCGAGC TGGAGGACCA TCCTGTGGCC GGCAGCGATC CCGAGCATCC GGGCCTGGTG
CGCATCTACA GGACGCCCGA GCAGCCCAAC GACCGCTACG AGAATTCCTG GCACTGCGAC
GCCACCTGGC GCGAGGCGCC GCCCATGGGC TGCGTGCTGC ACTGCGTGGA ATGCCCGCCC
GTGGGGGGTG ACACCCTGTG GGCCAACATG GCGCTGGCCT ACGAACGCCT GCCGGACGCC
GTCAAGGCGC TGATCGCGCC GCTGCGCGCG CGCCACAGCA TCGAATGCAC GTTCGGTGCG
GCCATGCCCA TCGAAAGGCG GCTGGCGCTC AAGGCCCAGT ACCCCGATGC CGAGCATCCC
GTGGTCCGCA CCCATCCCGA GACCGGCGAG AAGGTGCTGT TCGTGAACGG CTTCACCACG
CATTTCACCA ATTTCCATAC GCCCGCCAAT GTGCGCGTGG GCCAGGACTT CACGCAGGGT
GCCTCCGGCC TGCTGCAGTA CCTGATCGGC CAGGCTGCCA TCCCCGAGTA CCAGGTGCGC
TGGCGCTGGC GGGCGGGCAG CGTGGCGATC TGGGACAACC GCGCCACCCA GCACTACGCG
GCCATGGACT ACCCGCCCAG CCACCGGAAG ATGGAGCGCG CGGGCATCGT CGGCACGCCG
ACCTTCTGA
 
Protein sequence
MRIEPMTCAI GAELLGVRLA DAVRDDALFS EIRAALLRHK VLFLRDQGLT RAEHVAFARR 
FGELEDHPVA GSDPEHPGLV RIYRTPEQPN DRYENSWHCD ATWREAPPMG CVLHCVECPP
VGGDTLWANM ALAYERLPDA VKALIAPLRA RHSIECTFGA AMPIERRLAL KAQYPDAEHP
VVRTHPETGE KVLFVNGFTT HFTNFHTPAN VRVGQDFTQG ASGLLQYLIG QAAIPEYQVR
WRWRAGSVAI WDNRATQHYA AMDYPPSHRK MERAGIVGTP TF