Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_2001 |
Symbol | |
ID | 5747560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2186426 |
End bp | 2186953 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641297081 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001563026 |
Protein GI | 160897444 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAGA TTCGGGAACA GTCAGCTGGC AGCAGGCCAG CCACAAAGAG GAAAAGAATC CTCATGGTCT GCACAGGGAA CATCTGCCGC AGCCCCACGG CCCATGGCGT GCTCGAGAAA ATGGTGGCCG ACGCGGGCCT GGCTGACCGC ATCGAAGTGG ACTCCGCAGG CACGCACGAC TACCACGTGG GCGAGGCACC CGACCGCCGC TCCCAGGCCC ATGCCGCGCG GCGCGGCTAT GACCTTTCGC AGCAGCGCGC GCGGCAACTG CGGGCCGAAG ACTTCACGGC ATTCGACCAG GTGCTGGTGA TGGATGGCGC CAACGAATCT GCAGCGCGCA GGATTTGCCC CGAGTCCGAA TGGCACCGCG TACAGCGGCT GACGGACTTC TGCACCGAGC ACTCCGCGCG CGAAGTGCCC GACCCCTACT ACGGCGGCGA CCGGGGTTTC GAGGACGTGC TGGACCTGGT GGAAGACGCC TGCGCGGGGC TGCTGGCCAC GCTGGGCATG GCGCCGCGCA AGGGTTGA
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Protein sequence | MEQIREQSAG SRPATKRKRI LMVCTGNICR SPTAHGVLEK MVADAGLADR IEVDSAGTHD YHVGEAPDRR SQAHAARRGY DLSQQRARQL RAEDFTAFDQ VLVMDGANES AARRICPESE WHRVQRLTDF CTEHSAREVP DPYYGGDRGF EDVLDLVEDA CAGLLATLGM APRKG
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