Gene Daci_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1998 
Symbol 
ID5747557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2182840 
End bp2183505 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content68% 
IMG OID641297078 
Productelectron transport protein SCO1/SenC 
Protein accessionYP_001563023 
Protein GI160897441 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGTT CCGATTGCCA TGTGGCGCCG CAGCGCGCCG CCGATTTTTC TTCGACCCTC 
CCATCCGTTG CTTCCATTGC CCTGTCTCGC CGTGCCTGCC TTGGTGGCGG CCTGGCCGCA
CTGGCGCTGC TGGCCGGCTG CAAGCCCGCC ACCGTGCCGT TCAAGGGCAT CGACCTGACC
GGCGCGCAGT ACGGCCGGGA CTTCCGCCTG CGCGATGCCG ATGGGCGCGA GCGCACGCTG
GCCGACTTCA AGGGCCAGGC CCTGATGGTC TTTTTCGGCT TCACCCAATG CCCCGATGTC
TGCCCCACGG CGCTGACGCG CGCGCTGGAA ATACGCGAGC TTCTGGGTGC CGACGGCGCC
CGCCTGGCCG TGGCTTTCAT CACCATCGAT CCCGAGCGCG ATACGGCCCA GGTGCTCAAG
GCCTATGTGG GCGCCTTCGA CCCCGGCTTT GTCGCGCTGC GCGGTGACGA GGCGCAGACG
GCCGAGGTCG CCAGGGAGTT CAAGGTCTTC TACAAGAAGG TGCCCACGGG TGCGTCCTAC
ACCATGGACC ACTCGGCCAT CACCTATGTC TTCGATCCCG AGGGCCGGCT GCGCGTGGCG
TTCCGCCATG AGCAGGACGC GCAGGACTGC GCGGCCGATC TGCGGCAGAT CCTGCAGGCT
GCATGA
 
Protein sequence
MFRSDCHVAP QRAADFSSTL PSVASIALSR RACLGGGLAA LALLAGCKPA TVPFKGIDLT 
GAQYGRDFRL RDADGRERTL ADFKGQALMV FFGFTQCPDV CPTALTRALE IRELLGADGA
RLAVAFITID PERDTAQVLK AYVGAFDPGF VALRGDEAQT AEVAREFKVF YKKVPTGASY
TMDHSAITYV FDPEGRLRVA FRHEQDAQDC AADLRQILQA A