Gene Daci_1993 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1993 
Symbol 
ID5747552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2177906 
End bp2178733 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content69% 
IMG OID641297073 
ProductIclR family transcriptional regulator 
Protein accessionYP_001563018 
Protein GI160897436 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.080856 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCA ACACCATGAA CACCCGTGAC CCCATCCCTG CCCGTATCGA TGGCGACACG 
CCCAACCTGC GGCTGTTCGC CCTGCTGGAG GCCATTGCCC AGAAGAACGA GCCCTTCACG
CTGCAGACCA TGGTCGAGGA GACAGGCCTG CCCAAGCCCA CCATGCACCG CATGCTCCAG
CAGCTCGAGG GCGCGGGCAT CCTGCAGCGC GAGGGCAACG GCCGGCACTA CGGCACGGGC
CGGCGCCTGA TGCGGCTGGC CGAGAGCGTG CTGCTCAACA ACACCACGCA CGGCGCACGC
CACGCGGTGC TGGCCCAGCT GGTGCGCGAC ATCGGCGAGA GCTGCAACAT CACCGCCTTC
TCGGGCAGCG AGGTGCTGTA CCTGGACCGG GTGGAGACGC CCGCGCCGCT GCGCTTTTAT
CTGCACCCGG GCTCGCGCGT GCCGGCCCAT TGCTCGGCCA CGGGCAAGCT GTTCCTGAGC
CAGATGGCGC CCGCGCAGCG CAGGCGGCTG CTGTCGGCCG TGCCGCTGGA AGGCTTCACG
GCCAATACGT TGACGGCCTT TGACGCGCTG GACGCCGAAC TGGACCAGGT GCGCGCCCAG
GGCCATGCCT TCGACAACGA GGAATTCCTG CCCGGCCTGC TGTGCCTGGG CGTGCTCGTG
CCCTCCATCC AGGGCGGCCC CTCGAACATG GGGCTGGCCG TGCAGGCGCC CATCATGCGT
TTCACGCGCG AGCGGGCGCT GTCCTTTCTT CCCCAACTGC GCGCGGCGGC CGAGGCGATT
GCGCGCATCA ACGACGAAGT CCCCCCGGGA GCCCCTGACG ATGACTGA
 
Protein sequence
MMTNTMNTRD PIPARIDGDT PNLRLFALLE AIAQKNEPFT LQTMVEETGL PKPTMHRMLQ 
QLEGAGILQR EGNGRHYGTG RRLMRLAESV LLNNTTHGAR HAVLAQLVRD IGESCNITAF
SGSEVLYLDR VETPAPLRFY LHPGSRVPAH CSATGKLFLS QMAPAQRRRL LSAVPLEGFT
ANTLTAFDAL DAELDQVRAQ GHAFDNEEFL PGLLCLGVLV PSIQGGPSNM GLAVQAPIMR
FTRERALSFL PQLRAAAEAI ARINDEVPPG APDDD