Gene Daci_1986 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1986 
Symbol 
ID5747544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2170059 
End bp2171069 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content70% 
IMG OID641297065 
Productcobalamin synthesis protein P47K 
Protein accessionYP_001563011 
Protein GI160897429 
COG category[R] General function prediction only 
COG ID[COG0523] Putative GTPases (G3E family) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGC CGGCCGCCGC GGCGCAGCGG GCGCCCATTC CCATGGTCGT CGTGGGCGGC 
TACCTGGGCG CGGGCAAGAC CACCTTGCTC AACCGGCTGC TGGAGCGCGC CGATGGCCTG
CGCGTGGCCG TGCTGGTCAA CGACTTCGGC GAGATCAACA TTGACGCCGC CCTGATCCGC
ACACGCAGCA GCGACGTGCT GCAGCTGGAG AACGGCTGCA TCTGCTGCTC CATCGGCGGG
CGGCTGGCCG AGGCCCTGGC CGCCGTGGGC GCGCGGCCCG ACCGCCCGGA CCTGCTGGTC
ATCGAGGCCA GCGGCGTCTC CGACCCCGTG CGCATCGCCC AGGTCGGCAT GCTCGACCCC
GCGCTGCAGC TCAACGCCAT CCTGGTGGCG GTGGATGTCC AGGACGTCGA TGAGCAACTG
TGCGACCCGC TGGTCGGCGA CATGGTCCGC CGCCAGATCG CCGGCGCGAC GGCGCTGGTG
CTGACCAAGG CCGACCAGGC CAGTGCGCCG ATGATCGGCA AGGCAAGGCA GCGCCTGGCC
GAGATCGCCC CGCACACCAT GGTGCTGACC GCACAGTGCG GCGAGATTCC CCTGGCCGTC
TTCCTGGACG CTGTGCCCCT GCCACGCCAA CCGCAGCACC CGCAGCGCCT GCTGGGTGCG
CTTGCGGGTG AAGGTGGCGC CTGGAAGAGG GCCGTGGATG GCACGGCAGG TCTTGCCGGG
ATGGCAGGAA TCACCAGTTT CTCGTACACC ACGCACCGGC AATTCGACAA GCAGCGCCTC
AGGCAGGCAC TGCGCACCCT GCCGGTGCCG CTGCTGCGGG CCAAGGGCAT CGTGCGGCTG
CGGGGACAGC AGCCTTTGCA AGAAATCCAT GTGGTGGGAG GCCGGCTGCG CGTGGCGGAT
CTGGGCGCGG AGCAGGTGGC CGGGTCCGCC TTTGTCTTCA TTGGCTGCTT CACGGCGGCG
GGGCAGCAGG CGATTCGTGG CCAGCTGGAT GCCGCGTTGG CGCCGGAATG A
 
Protein sequence
MSTPAAAAQR APIPMVVVGG YLGAGKTTLL NRLLERADGL RVAVLVNDFG EINIDAALIR 
TRSSDVLQLE NGCICCSIGG RLAEALAAVG ARPDRPDLLV IEASGVSDPV RIAQVGMLDP
ALQLNAILVA VDVQDVDEQL CDPLVGDMVR RQIAGATALV LTKADQASAP MIGKARQRLA
EIAPHTMVLT AQCGEIPLAV FLDAVPLPRQ PQHPQRLLGA LAGEGGAWKR AVDGTAGLAG
MAGITSFSYT THRQFDKQRL RQALRTLPVP LLRAKGIVRL RGQQPLQEIH VVGGRLRVAD
LGAEQVAGSA FVFIGCFTAA GQQAIRGQLD AALAPE