Gene Daci_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1963 
Symbol 
ID5747521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2150287 
End bp2150793 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content60% 
IMG OID641297042 
Producthypothetical protein 
Protein accessionYP_001562988 
Protein GI160897406 
COG category[R] General function prediction only 
COG ID[COG3926] Putative secretion activating protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATT TTCTTTCTGC ATTTGAAAAT GCCCTTATGA ATGAAGGAGG GTATCAGCTG 
ACCAACGTTT CTGGCGACAA GGGCGGCATG ACGTATGCCG GGATCGCGCG CAACCGCTGG
CCGAACTGGA GCGGGTGGGA TGCCATCGAT GCTGGTGGCC GGCCTGCTGC AGATGCAGTA
CGAGCCTTCT ACAAGCAGAA CTTCTGGGAT GTGATGCGGC TGGATGACGT GTCGTCACAA
GTGATCGCCC GGCACCTGTT TGACTTCGGG GTGAATGCCG GAACGGGCAC GGCTGTGAAG
ATTGCCCAGG TGGTGGCTGG AGTCACGCCA GATGGCGCAG TCGGCCCGCT CACCCTGGCG
GCGCTCAACA TGGCCGACCC TGAGCTTTTC AGCGCGCGGT ACACCATCGC CAAAATGGCC
CGCTACCGCG ATATCGTCAC GCGCGACAGG AGCCAGAGCA AATTCCTGCT GGGCTGGCTC
AACCGTACCC TCAAGGAGGC CGCATGA
 
Protein sequence
MSDFLSAFEN ALMNEGGYQL TNVSGDKGGM TYAGIARNRW PNWSGWDAID AGGRPAADAV 
RAFYKQNFWD VMRLDDVSSQ VIARHLFDFG VNAGTGTAVK IAQVVAGVTP DGAVGPLTLA
ALNMADPELF SARYTIAKMA RYRDIVTRDR SQSKFLLGWL NRTLKEAA