Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1946 |
Symbol | |
ID | 5747504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2136096 |
End bp | 2137016 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641297025 |
Product | putative phage major head protein |
Protein accession | YP_001562971 |
Protein GI | 160897389 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0361046 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCAC CCAGCGGAAC CTTCCTGACC ACGGCTGCCA TCGGCAACCG TGAAGACCTG ACCGATGTGA TCTATCGCAT CAGCCCGACC CAGACGCCCA CGCTGAACAT GGCGTCCAAG GCCAAGGCGA CCAATACCCT GCATGAGTGG CAGACTCAGG ACCTGGCAGC CGCCGCGTCC AATGCCGCCG TGGAAGGTGA CGACGCCGCT GCCAAGACCG TGACGCCCAC TGTGCGCTTG AACAACCGCA CGCAGATCAG CACGAAGACC GTGCGCGTGT CCGGCACCCA GCGCGCGATG AATCCTGCGG GTCGCAAGGA TGAACTGGCC TACCAGTTGT CCCTGGCCTC GCTGGAAATC AAGCGTGACA TGGAGCTGGA CCTGACGCAA AGCGATGTGG CGGCGACCTC TCCCCGCAAG TCGCGCGGCC TGCGTGGCTG GGTGGTGGAC AACGTGAACC GCAACGGCGG CACGCTGGCC GACTACGTGG CCAACACCGG CTACACCCCC GGCACGCAGC GTGCGTTCGT GGAGTCGCAG GTGAAGGACG TGCTGCAGAA GTGCTACACG GCTGGCGGCG AGCCAGACAC GATCATGATG CCTCCCGCTG CCAAGCAGAC GTTCTCGACG TTCACCGGCA ACGCGACGCG CATGGACAAG TCGGAGGACT CCAAGCTGTA CGCATCGGTG GACTACTACG TGTCCGACTT CGGCACGATC CAGGCCGTTC CGAACCGCTT CATGGCCACG CGCGACGTGT TCCTGCTGCA GTCGGACAAG CTGGCCGTGG CCTACCTGCG CCCCTTCCAG ACCACCGACA TCGCCAAGAC CGGCGACAGC GATGCTCAAC AGATCATCGT TGAGTACACG CTGGAATGCC GCGCTCCCAA GGCGCACGGC GCGGTGTACG ACATCCTGTA A
|
Protein sequence | MAAPSGTFLT TAAIGNREDL TDVIYRISPT QTPTLNMASK AKATNTLHEW QTQDLAAAAS NAAVEGDDAA AKTVTPTVRL NNRTQISTKT VRVSGTQRAM NPAGRKDELA YQLSLASLEI KRDMELDLTQ SDVAATSPRK SRGLRGWVVD NVNRNGGTLA DYVANTGYTP GTQRAFVESQ VKDVLQKCYT AGGEPDTIMM PPAAKQTFST FTGNATRMDK SEDSKLYASV DYYVSDFGTI QAVPNRFMAT RDVFLLQSDK LAVAYLRPFQ TTDIAKTGDS DAQQIIVEYT LECRAPKAHG AVYDIL
|
| |