Gene Daci_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1946 
Symbol 
ID5747504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2136096 
End bp2137016 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content64% 
IMG OID641297025 
Productputative phage major head protein 
Protein accessionYP_001562971 
Protein GI160897389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0361046 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCAC CCAGCGGAAC CTTCCTGACC ACGGCTGCCA TCGGCAACCG TGAAGACCTG 
ACCGATGTGA TCTATCGCAT CAGCCCGACC CAGACGCCCA CGCTGAACAT GGCGTCCAAG
GCCAAGGCGA CCAATACCCT GCATGAGTGG CAGACTCAGG ACCTGGCAGC CGCCGCGTCC
AATGCCGCCG TGGAAGGTGA CGACGCCGCT GCCAAGACCG TGACGCCCAC TGTGCGCTTG
AACAACCGCA CGCAGATCAG CACGAAGACC GTGCGCGTGT CCGGCACCCA GCGCGCGATG
AATCCTGCGG GTCGCAAGGA TGAACTGGCC TACCAGTTGT CCCTGGCCTC GCTGGAAATC
AAGCGTGACA TGGAGCTGGA CCTGACGCAA AGCGATGTGG CGGCGACCTC TCCCCGCAAG
TCGCGCGGCC TGCGTGGCTG GGTGGTGGAC AACGTGAACC GCAACGGCGG CACGCTGGCC
GACTACGTGG CCAACACCGG CTACACCCCC GGCACGCAGC GTGCGTTCGT GGAGTCGCAG
GTGAAGGACG TGCTGCAGAA GTGCTACACG GCTGGCGGCG AGCCAGACAC GATCATGATG
CCTCCCGCTG CCAAGCAGAC GTTCTCGACG TTCACCGGCA ACGCGACGCG CATGGACAAG
TCGGAGGACT CCAAGCTGTA CGCATCGGTG GACTACTACG TGTCCGACTT CGGCACGATC
CAGGCCGTTC CGAACCGCTT CATGGCCACG CGCGACGTGT TCCTGCTGCA GTCGGACAAG
CTGGCCGTGG CCTACCTGCG CCCCTTCCAG ACCACCGACA TCGCCAAGAC CGGCGACAGC
GATGCTCAAC AGATCATCGT TGAGTACACG CTGGAATGCC GCGCTCCCAA GGCGCACGGC
GCGGTGTACG ACATCCTGTA A
 
Protein sequence
MAAPSGTFLT TAAIGNREDL TDVIYRISPT QTPTLNMASK AKATNTLHEW QTQDLAAAAS 
NAAVEGDDAA AKTVTPTVRL NNRTQISTKT VRVSGTQRAM NPAGRKDELA YQLSLASLEI
KRDMELDLTQ SDVAATSPRK SRGLRGWVVD NVNRNGGTLA DYVANTGYTP GTQRAFVESQ
VKDVLQKCYT AGGEPDTIMM PPAAKQTFST FTGNATRMDK SEDSKLYASV DYYVSDFGTI
QAVPNRFMAT RDVFLLQSDK LAVAYLRPFQ TTDIAKTGDS DAQQIIVEYT LECRAPKAHG
AVYDIL