| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1941 |
|---|
| Symbol | |
|---|
| ID | 5747499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 2130548 |
|---|
| End bp | 2131021 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641297020 |
|---|
| Product | putative terminase small subunit protein |
|---|
| Protein accession | YP_001562966 |
|---|
| Protein GI | 160897384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.138517 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0000797502 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCGTA TCAGCACATT CAATGAAGAC ATCGCAACAA AGCTCTGTGA CCGGATAGCA
GCAGGAGAGT CCCTCCGCAA GATCTGCACG GATCCCAAGA TGCCGAGCAT GGCGACTGTG
ATGCGGTGGC TGGGAAAGCC TGAGAACGCG GCTTTCCGAG AGCAATACGC ATGCGCGCGT
GATGCCCAGG CCGACAAGCT GGTCGAAGAG ATGCTGGAGA TCGCCGACGA GGAATGCACG
ATGGTGCGAT CCGATAAGCA CGGCAGCAAG GACGATGACG GCCAGGGAAA CACCGAGGTC
GTGTTTGACG CCACGGCGGT CGCTCGCAAC AAGCTGCGTG TGGATGCCCG CAAGTGGGTG
GCCAGCAAGA TGGCCCCGAA GAAATACGGC GACAAGGTGA CCCAGGAGGT CGTCGGTGCC
GGTGGCGGCC CAGTCGAGAC CGTTACGAGA ATAGAGCTAG TCCCCCTGAA ATGA
|
|---|
| Protein sequence | MGRISTFNED IATKLCDRIA AGESLRKICT DPKMPSMATV MRWLGKPENA AFREQYACAR
DAQADKLVEE MLEIADEECT MVRSDKHGSK DDDGQGNTEV VFDATAVARN KLRVDARKWV
ASKMAPKKYG DKVTQEVVGA GGGPVETVTR IELVPLK
|
|---|
| |