Gene Daci_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1939 
Symbol 
ID5747497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2128762 
End bp2129337 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content64% 
IMG OID641297018 
Productlambda NinG family protein 
Protein accessionYP_001562964 
Protein GI160897382 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0633866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000032667 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTTCC GTCGCACACG CTGCGCCCAC TGTCGCGCCA AGCTGGACCC CGGCCAGCGC 
ATCCACCCAC ATTGCATTGC CGGTTACGCC GAAGCCGAGG GCGCCAAGGC AGAGCGCAAG
CGACAGAAGC AGGCGAGAGC TGCAGCCAGG GTAGAGAAGG CAGAGACACG TCGGCGCAAG
GAGGCCACCA AGCCGCGCGC CAAGTGGCTG TCCGAGTGCC AGGACATCAT CAACAAGATC
GTCCGTCTGC GCGACAAGCA CTTGGGCTGC TGCTCATGTG ACCGCGGCCC CGAATGGGAT
GGCCAGTGGC ACGCATCGCA CCTGCGTTCC GTGGGCGCCG CGTCAGCAGT CCGGTTCAAC
CTCTGGAACA TCCACAAGGG CTGCTCCATC TGCAACAACC ACCTGAGCGG CAACCTGGCC
GAGTACCTGC CGCGCATCCG CGCCCGCATC GGCGATGAGA AGGTGGACTG GCTCTACACC
CAGAACCAGC TCGTCAAGCA CGACGTCGAG TACCTCAAGA AATTCAAGCG AGTGATGGGC
AAGCGCCTGC GCCGCATCGA AAAACGCTGC AACTGA
 
Protein sequence
MTFRRTRCAH CRAKLDPGQR IHPHCIAGYA EAEGAKAERK RQKQARAAAR VEKAETRRRK 
EATKPRAKWL SECQDIINKI VRLRDKHLGC CSCDRGPEWD GQWHASHLRS VGAASAVRFN
LWNIHKGCSI CNNHLSGNLA EYLPRIRARI GDEKVDWLYT QNQLVKHDVE YLKKFKRVMG
KRLRRIEKRC N