| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1908 |
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| Symbol | |
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| ID | 5747465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2109476 |
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| End bp | 2110792 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641296986 |
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| Product | seryl-tRNA synthetase |
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| Protein accession | YP_001562933 |
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| Protein GI | 160897351 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0172] Seryl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.301857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000878717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGATA TCCTTCTTCT TCGCAAAGAC CTTGACTCGG CCGTCGCACG GCTGGAGACC
CGCAAAAAGC CCCAGGCCTT CCTGAATGTG GAGGCCTTCC AGTCCCTGGA AGCAGAGCGC
AAGTCCCTGC AGACACGGAC CGAGGAGCTG CAGTCCAAGC GCAACCAGCT GTCCAAGCAG
ATCGGCATGC TGATGGGCAA GGGCGAGAAG GACGCTGCCG AGGCCGCCAA GGCCGAAGTC
GGCAGCCTCA AGACCGAGCT GGACCAGTCG GCCACGCGCC TGGAGCAGAT TCAGGGCGAG
CTGCAGACCA TGCTGCTGGC CGTGCCCAAC CTGCCGCACG ACAGCGTGCC CGTCGGTGCG
GACGAAAGCG GCAATGTGGA GGCGCGCCGC TGGGGCACGC CCAAGACCTT TGATTTCGAG
GTCAAGGACC ATGTGGACGT GGGCCAGCCG CTGGGACTGG ACTTCGACAT GGGCGTCAAG
CTGTCGGGCT CGCGCTTCAC CGTGATGAAG GGCCCCATCG CCCGCCTGCA CCGCGCCCTG
GCGCAGTTCA TGATCGACCT GCAGACCGAC TCGCATGGCT ACACCGAGTG CTATGTGCCC
TACGCCGTCA ATGCCGACTC GCTCAAGGGC ACGGGCCAGT TGCCCAAGTT CGAGGGCGAC
CTGTTCGCCG CCAAGAAGGG CGGCCAGGAC GGCGAGCCGG TGCCCGACAA CGCGGCGCTC
TACCTGATTC CCACGGCCGA GGTGCCGCTG ACCAACTTCG TGCGCGACGT GGTCGTGGCC
GAGGACCAGC TGCCCATCAA GCTCACGGCC CACAGCCCCT GCTTCCGTTC CGAGGCCGGC
AGCTATGGCC GCGACACGCG CGGCATGATC CGCCAGCACC AGTTCGACAA GGTCGAGATG
GTGCAGATCG TGCATCCGGA AAAGAGCTAC GAGGCGCTGG AAGAAATGAC GGGCCACGCC
GAGGCCGTGC TGCAGAAGCT GGGCCTGCCC TACCGCGTGA TGAGCCTGTG CACGGGCGAC
ATGGGCTTTG GCGCGGCCAA GACCTATGAC CTGGAAGTCT GGCTGCCTGC GCAGAACACC
TACCGCGAGA TCAGCTCGGT CTCCAACTGC GAGGCCTTCC AGGCCCGCCG CCTGCAGGCA
CGCTTCAAGA ACGCCCAGGG CAAGAACGAG CTGGTGCACA CGCTCAACGG TTCCGGCCTG
GCCGTGGGCC GCACGCTGGT GGCTGTGCTG GAGAACTACC AGAACGCCGA CGGCTCGGTG
ACCATCCCCG AGGCGCTGCG CCCGTACATG GGTGGACAGA CTTTGCTGAA GGCCTGA
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| Protein sequence | MLDILLLRKD LDSAVARLET RKKPQAFLNV EAFQSLEAER KSLQTRTEEL QSKRNQLSKQ
IGMLMGKGEK DAAEAAKAEV GSLKTELDQS ATRLEQIQGE LQTMLLAVPN LPHDSVPVGA
DESGNVEARR WGTPKTFDFE VKDHVDVGQP LGLDFDMGVK LSGSRFTVMK GPIARLHRAL
AQFMIDLQTD SHGYTECYVP YAVNADSLKG TGQLPKFEGD LFAAKKGGQD GEPVPDNAAL
YLIPTAEVPL TNFVRDVVVA EDQLPIKLTA HSPCFRSEAG SYGRDTRGMI RQHQFDKVEM
VQIVHPEKSY EALEEMTGHA EAVLQKLGLP YRVMSLCTGD MGFGAAKTYD LEVWLPAQNT
YREISSVSNC EAFQARRLQA RFKNAQGKNE LVHTLNGSGL AVGRTLVAVL ENYQNADGSV
TIPEALRPYM GGQTLLKA
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