Gene Daci_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1907 
Symbol 
ID5747464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2108640 
End bp2109338 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content72% 
IMG OID641296985 
ProductCBS domain-containing protein 
Protein accessionYP_001562932 
Protein GI160897350 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.416143 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000404489 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTTTTTG TCTTCGGTCC CAACGGACAG ATGTTTCGCG GTCCCGCCGA GCGGCTGGGC 
CAAGTGGCGC CCGTGCGCCG CGTACAACGC CCGCAGGCCC TGCGCACACG CTCGGCCGAT
GTGATGGCGG GCGACGCCGC CGCCTCGTTC CCCGCCATCC TGGCCGACCT CGCGGGCCAG
CCTGCCGCCG CGCCGGAGCC CGCTCCGCGG CTGCGCGGAG CGGTCGATGC CTACCTTTCC
ACGGAAAAAG GCCCCAGCCA GCCACGCCAG CCCCTGCAGA CCGTGGCCGA CGTGATGAGC
CACGAGGCCG TGACGGTATC GCCCGAGGCC GGTGTCAACG ACGCCTGGCG CGTGCTGGCC
GAGCATGGCG TGGCCCAGGC CCCCGTGCTG GATGCCGGTG GCCGCGTGGT CGGGCTGCTG
CTGCGTGCCG ATATGGCGCC GCTGGACCTG CTGCCCGAGC CCGGTGCGAT CAAGGACGCC
ATTGCCCTGG CGCGCCGGCC CGTGAACGAG GTCATGATCT CCCCCATTCC CACGGTGGCC
ACCACCACCG ACCTGCGCCG CGTGGCCGGC GTGCTGCTGG AGACCGGCCT GCCGGGCCTG
CCCGTGACCG ATGAGCAGGG CCTGCTGGCC GGCTTCATCA GCCGCACCGA CATCCTGCGC
GCCGTGGCCT CCGATCCGCC GCTGGATCTG TGGAGCTGA
 
Protein sequence
MFFVFGPNGQ MFRGPAERLG QVAPVRRVQR PQALRTRSAD VMAGDAAASF PAILADLAGQ 
PAAAPEPAPR LRGAVDAYLS TEKGPSQPRQ PLQTVADVMS HEAVTVSPEA GVNDAWRVLA
EHGVAQAPVL DAGGRVVGLL LRADMAPLDL LPEPGAIKDA IALARRPVNE VMISPIPTVA
TTTDLRRVAG VLLETGLPGL PVTDEQGLLA GFISRTDILR AVASDPPLDL WS