Gene Daci_1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1905 
Symbol 
ID5747462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2107093 
End bp2107563 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content70% 
IMG OID641296983 
Productpeptidylprolyl isomerase FKBP-type 
Protein accessionYP_001562930 
Protein GI160897348 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0000301145 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTCTA GCGCTTCTTC CTCGGCCCTC CCCACGGTCC AGACCGGCTC GTTCCTCACG 
CTGCACTACC GCCTGTCCGG GCCTGCAGGC GATGTGATCA ACACCTTCAA CGACAAGCCC
GCCACGCTGT CCCTGGGCGC GGGCGAGCTG TCGCCCGCCG TCGAGCAGCG CCTGCTGGGC
CTGGCCGAAG GCACGCGCAC CACGTTCGAG ATGCCGGCCG GCGAAGCCTT CGGCGAGCGC
AACGGCGACA TGATGCAGTG GGTGGCGCGC AAGCTGATGA ACGAGCTGGG CGACCCGCAC
GAGCAGTACG CGCCCGGCGA CGTGGTGCAG TTCCCCACGC CCGACGGCCT GGGCAGCTAC
GCGGGCGCCG TGGTGCAGGT GCGCGAGGAC GGCGCCGTGC TGTTCGACTT CAACCACCCG
CTGGCGGGCC AGCCGGTGAC GTTCGAAGTG CAGATCATCG GGGTGCTCTG A
 
Protein sequence
MTSSASSSAL PTVQTGSFLT LHYRLSGPAG DVINTFNDKP ATLSLGAGEL SPAVEQRLLG 
LAEGTRTTFE MPAGEAFGER NGDMMQWVAR KLMNELGDPH EQYAPGDVVQ FPTPDGLGSY
AGAVVQVRED GAVLFDFNHP LAGQPVTFEV QIIGVL