Gene Daci_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1901 
Symbol 
ID5747458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2103745 
End bp2104251 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content69% 
IMG OID641296979 
ProductMarR family transcriptional regulator 
Protein accessionYP_001562926 
Protein GI160897344 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.015299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTGA ATCCAGACAT CCTCGCCGTG CCCCAGGGCT GCACCAACCA CCGCGTGCGC 
CAGCTCATGC GCAGCGTGGG CCAGGTGTAT GACGCCCATC TGAACGAGAC GGGGCTGCGC
ATCACGCAGT ACTCGCTGCT CAGCCACGTG CTGGCCGCCA GTCCGGTGCG GCCCTCGGAC
CTGGCGCGGC GCATGCGCAT GGACGCCTCG ACGCTGACGC GCAACCTCAA GCCGCTGATC
GACGCCGGCT GGGTGCGCAT GGGCCAGGGC GAGGACCAGC GCAGCCGCCT GGTGCACATC
ACCGACGCGG GCCAGGCCAA GCGCGAAGAG GCCAAGCAAA GCTGGAAGAC TGCACAGAAC
GAGCTCAACG CCCGCGTGGG CCTGGAGCGC GTGGCGGCCC TGCATGCGCT GATCGACGAA
TGCCTGGTGC TGCTCGATGG CGGCGATGGC GATGGCGCTG GTGGTGGCGC TGGCGATGGC
AACGCTGCAG ACGGCCCGCA GGCGTAG
 
Protein sequence
MPVNPDILAV PQGCTNHRVR QLMRSVGQVY DAHLNETGLR ITQYSLLSHV LAASPVRPSD 
LARRMRMDAS TLTRNLKPLI DAGWVRMGQG EDQRSRLVHI TDAGQAKREE AKQSWKTAQN
ELNARVGLER VAALHALIDE CLVLLDGGDG DGAGGGAGDG NAADGPQA