| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1899 |
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| Symbol | |
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| ID | 5747456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2100802 |
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| End bp | 2102970 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641296977 |
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| Product | 5'-nucleotidase domain-containing protein |
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| Protein accession | YP_001562924 |
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| Protein GI | 160897342 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.0262813 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAGGG AAGGCCGGGT CGCCACCTGT CACACCCCTG TAAACCCCCA CCACCACACT
CCCCCCCTTC ACCACCCCCA CAAAAACCAC ATGCCGCTGA GCAAACTCCC CACATTGCAA
TCCCTGCTCC TGTCCCGCCG CCTGGCGCTG AGCGTCCTGG CCAGCGCCGC GCTGGTGGCC
GCCTGCGGTG GCAGCGACAG CAACGACAGC ACGACGCCCC CGGTGGCCAG CCAGCCCGCG
ACGGCCACGC TGGCCGTGCT GGAGACCACG GATCTGCACT TCAATGTGCG CAGCTATGAC
TATTTCAAGC TGGCCGAGGA TGCCTCCTAC GGCTTCGAGC GCACGGCCAC GCTGGTGCGT
GCGGCGCGCA AGGAGTTTGC CAATACGCTG CTGGTGGACA ACGGCGACAC CATTCAGGGC
ACGGCCCTGG CCGATTACGA GGCCGAGGTG GCCAAGATCC CCTGCACGCA GCAGCTGTCC
ATGTACAAGG CCATGGGCGC GCTGGGCTTT GATGCGGGCA CGCTGGGCAA CCATGAGTTC
AACTACGGCC TGCCCTTCCT GAACCAGGTG CTGGGCGGCG GCCTGGACGT GGACGGCGTG
GACAAGGCGC TCAAGTGCGC GGGCAACGGC TTTCCCATGG CGCTGTCGAA TGTCTACAGC
AGCAAGACCA AGCAGCCGCT GGTGCAGCCC TACGTGATTC TGGAGCGCAA GATCGCGGCC
AAGGACAAGG ATGGCAAGGC GGTGGAGCTG CCCATCAAGA TCGGCGTGAT CGGCTTCACC
ACGCCGGGCA TCATGAACTG GGACAAGCGC TATCTGGAGG GCAAGCTCTA CACCGAAGGC
GCCGTGGAGT CCGCCCAGAA GTACCTGCCC GAGATGCGCG CCAAGGGCGC CGATGTGGTG
GTGGCCATGC TGCACGGCGG CCTGGATGGC GCGGCCTACT CGCCGACGAT GGAGAACCCC
GGCCTGCACC TGAGCAAGGT GGCCGGCATC GACGCCATGG TCATGGGCCA CCAGCACAGC
GTGTTCCCGG ATGCGGCGGC CACGCCGGCC TTCACGCAGG CGGGCGTGGA CAACAAGGCG
GGCACCATCA ACGGCGTGCA GTCGGTGATG GCCAGTTCCT GGGGCAAGGC GCTGGGCGTG
ATCCAGCTGG CGCTCAAGTG GGACGGCAAG CAGTGGAGCG TGGACAAGAG CGCGGGCAAG
AGCGAGCTGC GCAATATCCA GACCGGCAAG GACGCCGCAG GCAAGGCCAC CTACGTGGCC
GTGGACCCGA CGGTGGCGCC GCTGATCGAG AGCCAGCACC AGGCCGCCAT CCAGTACGTG
AAGACGCCCA TTGGCAGCAC GGACTTCCGC ATGAGCACGC TGTTCGCCGA TGTGGGCGAC
CCGGGCGCCA TCCAGATCGT CAACCAGGCG CAGCGCGACT ATGTGGCCGA CTATGTGAAG
GCCAGCCTGC CGCAGTACGC GCAGCTGCCC GTGCTGTCGG TGAGCGCGCC GTTCAAGTCG
GGCTTCCAGG GCGGCGCCGA CTACACCGAC GTGGCCGTGG GCCCGCTGGC CATCTACAAC
GCGGCCGACC TGTACCTGTA CCCCAACACC GTGTATGCGG TGAAGGTGAA TGGCGCCGAC
ATCAAGGACT GGCTGGAGGC CGCTGCCAAG CGCTTCAACC AGATCGATCC GGCCAAGACG
GGGGAGCAGC AGCTGATCAG CACCTTCCCG GGCTACAACT TCGACATGTT CACCACGGCC
GATGTGCAGT ACGAGATCGA CGTGACCCAG CCCGTGGGTA GCCGCATCAA GAACCTGCAG
TACCTGGGCA AGGCCATCGA CCCGGCGCAG GAGTTCGTGA TCGCCACGAA CAACTACCGC
GCCACCAGCG GCAAGAGCTT CATCGCCAAG CTCGACGGCT CCAGCGCCAT CTGGGCCTCG
CCGGATGCCA ACCGCGACGT GGTGATCGGC TACGTGCGCA AGAAGGGCAG CATTACGCGC
GCTGCCAATG GCGCGGCCAA GAGCTGGCGC TTCACCAAGG TGGCCACCTC GGCCAACGTG
GTGTTCAGCT CCGGCGCCAA CGCGCTGCCG GTGGCGCAGG CGGCGGGCCT GGCCAACATC
TCGCTGGTGG CCGCCGATGA CGGCTCGGGC AAGGGCACGT CCAAGTACCG CCTGGATCTG
TCGAAGTAA
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| Protein sequence | MAREGRVATC HTPVNPHHHT PPLHHPHKNH MPLSKLPTLQ SLLLSRRLAL SVLASAALVA
ACGGSDSNDS TTPPVASQPA TATLAVLETT DLHFNVRSYD YFKLAEDASY GFERTATLVR
AARKEFANTL LVDNGDTIQG TALADYEAEV AKIPCTQQLS MYKAMGALGF DAGTLGNHEF
NYGLPFLNQV LGGGLDVDGV DKALKCAGNG FPMALSNVYS SKTKQPLVQP YVILERKIAA
KDKDGKAVEL PIKIGVIGFT TPGIMNWDKR YLEGKLYTEG AVESAQKYLP EMRAKGADVV
VAMLHGGLDG AAYSPTMENP GLHLSKVAGI DAMVMGHQHS VFPDAAATPA FTQAGVDNKA
GTINGVQSVM ASSWGKALGV IQLALKWDGK QWSVDKSAGK SELRNIQTGK DAAGKATYVA
VDPTVAPLIE SQHQAAIQYV KTPIGSTDFR MSTLFADVGD PGAIQIVNQA QRDYVADYVK
ASLPQYAQLP VLSVSAPFKS GFQGGADYTD VAVGPLAIYN AADLYLYPNT VYAVKVNGAD
IKDWLEAAAK RFNQIDPAKT GEQQLISTFP GYNFDMFTTA DVQYEIDVTQ PVGSRIKNLQ
YLGKAIDPAQ EFVIATNNYR ATSGKSFIAK LDGSSAIWAS PDANRDVVIG YVRKKGSITR
AANGAAKSWR FTKVATSANV VFSSGANALP VAQAAGLANI SLVAADDGSG KGTSKYRLDL
SK
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