Gene Daci_1885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1885 
Symbol 
ID5747442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2086070 
End bp2088196 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content72% 
IMG OID641296963 
ProductCoA-binding domain-containing protein 
Protein accessionYP_001562910 
Protein GI160897328 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCT CCACTTCCAT TGCCGCCGCC GCTGTCTCCG GCGCCACGCA GTCCTCCCGC 
CGGTTCTTGC GCCAGGTCCT GCTGGAGCCT GCAAGCATCG CCCTGGTGGG TGCCTCCGAC
GACGTCGGCA AGACCGGCGG GCGGCCGCTG CAGTTCCTGC GGCGCGCGGG CTTTGCCGGC
ACCATCTACC CCATCAATCC ACACCGCAGC CAGGTCCAGG GCGAGCCCGC CTGGCCCAGC
CTGGCCGCCT TGCCCGAGGT GCCAGACCAT GTCTTCGTGC TCTCGCCCAC CGGGACCGTA
CTGGAGACCG TGCGCGAATG CGCGCGGCTG GGAGTGGGCG TGGTCACCAT TTTGGCCAGC
GGCTTTTCCG AGTCGGGCCC CCAAGGCGCG CAACGCGAGC AGCAGCTGCG GCAGATCGCG
CGTTCCACGG GCCTGCGCAT CCTGGGGCCC AGCAGCCTGG GCGTGGTCCA TCCGCGCAAC
GGCCTGGTGC TCACGGCCAA CGCGGCCTTT GCCGAGCCCG ATGTGCCCAG CGGCAAGGTC
TTCGTGGCAT CGCACAGCGG CAGCATGATC GGCGCCCTGG TCTCGCGCGG CAAGGCGCGC
GGCGTGGGGT TCGCGGGCCT GGTCTCTGTG GGCAGCGAGG TGGACCTGAG CGTGGGCGAG
ATCTGCGCGG CCACGCTGGA CGATCCAGGC ATAGAAGGCT ATGTGCTGTT CCTGGAGAGC
CTGCGCCATG GCGATGCGCT GCAGGCCTTT GCGCGCGAGG CCGCGTTGCG CGGCAAGCCC
GTCATCGCCT ACAAGCTGGG CCGCTCCAGC GCCGCTGCCG AGATGGCAGC CACGCACACG
GGCGCGCTGG CGGGCGAGGA CGATATCGCC GATGCCTTCC TCAAGGGCCT GGGCGTGGCG
CGCGTGGACA TGCTGGAGAC GCTGTTCGAG GTGTTCCCGC TGGCGCGCAA GCTGCCCCTG
GCCGGCGCCA GCCCTGCCTG TGGCCAGCGC GTGGCCGTGG TCACCACCAC GGGCGGCGGT
GCGGCCATGG TGGTGGACCA GCTGGGCCTG CGCGGCATCA CCGTGCAGCC CGTGGCCGGC
GAGACGCTGG CCCGCCTCAA GGAGGCCGGC ATCCCCGGCA GCGCAGGCCG CGTGCTGGAC
CTGACCCTGG CCGGCACGCG CTACGAAGTG ATGAAGAAGG CGCTGGACAT CCTGCTGCAG
GCCCCCGAGA TCGACATGGT GGTGGCCGTC GTCGGCTCGT CCGCCCGCTA TCAGCCGGAC
CTGGCGGTGC GTCCCATCAT GGACAGCGCC GACCATGCCA AGCCCCTGGT GGCCATGCTC
GTGCCCGACG CGCCGCAGGC CCTGGCCGCG CTGACCGAGG CACAGATTCC CTGCTTTCGC
ACGCCGGAGA GCTGCGCCGA CGCCATTGCC AGCGTGCTGG CACGGCGCGT TCCGGGTCCG
GTGGCCGCTG TCCCTGCGCT GCGGGGCGAG GGTCGTGCGC TCAGCGAGGC CCAGGCCTAT
GCGCTGTTCG ACGCGCTGCA GATGCCGCAT GCGCCCTTTG CCTGCCTGCC TTTGCAGGGG
CCGGTCGGGG ACCTGCCGTT TGACTACCCC GTGGTGGCCA AGCTGTGCTC GCCGGCCATT
GCGCACAAGA CCGAGGTCGG TGGCGTGGTG CTGGGCGTTG GCACGGCGCA GGAGCTGGAC
GGTGCCCTTG CCACCCTGCG CTCCAACCTG GCGCGCAATG CGCCGGGCAC GGCCTGCGAC
CAGGCGCTGG TGCAGCCCCT GTGCAAGGGC CTGGCCGAGG TGCTGGTGGG CTACCGCATC
GACCCCGATG CAGGCCCCGT CATCATGCTG GCCGCTGGCG GCATCTGGGC CGAGGTGCTG
CGCGACCGCA GCATCCGCAT GGCCCCCGTG TCCGTGGAAA CCGCCCGGGA AATGGTCGCC
GAGGTCCGGC TGCTGCAGAC CGTCTCCGGC CTGCGCGGCA AGCCCCGGGG TGACCTGGAG
GCGCTGGCAC ATGCCATCGC CGCCCTGTCC CGCCTCGCCC TGCGTCCCGA GCTGGGCGTG
CTGGAGGCCG AGGCCAACCC GCTCATGGTC CTGCCCGAAG GGCAGGGCGT GGTGGCCGTC
GATGCACTGG TGCTGCAGGC GTGCTGA
 
Protein sequence
MNASTSIAAA AVSGATQSSR RFLRQVLLEP ASIALVGASD DVGKTGGRPL QFLRRAGFAG 
TIYPINPHRS QVQGEPAWPS LAALPEVPDH VFVLSPTGTV LETVRECARL GVGVVTILAS
GFSESGPQGA QREQQLRQIA RSTGLRILGP SSLGVVHPRN GLVLTANAAF AEPDVPSGKV
FVASHSGSMI GALVSRGKAR GVGFAGLVSV GSEVDLSVGE ICAATLDDPG IEGYVLFLES
LRHGDALQAF AREAALRGKP VIAYKLGRSS AAAEMAATHT GALAGEDDIA DAFLKGLGVA
RVDMLETLFE VFPLARKLPL AGASPACGQR VAVVTTTGGG AAMVVDQLGL RGITVQPVAG
ETLARLKEAG IPGSAGRVLD LTLAGTRYEV MKKALDILLQ APEIDMVVAV VGSSARYQPD
LAVRPIMDSA DHAKPLVAML VPDAPQALAA LTEAQIPCFR TPESCADAIA SVLARRVPGP
VAAVPALRGE GRALSEAQAY ALFDALQMPH APFACLPLQG PVGDLPFDYP VVAKLCSPAI
AHKTEVGGVV LGVGTAQELD GALATLRSNL ARNAPGTACD QALVQPLCKG LAEVLVGYRI
DPDAGPVIML AAGGIWAEVL RDRSIRMAPV SVETAREMVA EVRLLQTVSG LRGKPRGDLE
ALAHAIAALS RLALRPELGV LEAEANPLMV LPEGQGVVAV DALVLQAC