Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1877 |
Symbol | |
ID | 5747434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2074429 |
End bp | 2075616 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641296955 |
Product | PepSY-associated TM helix domain-containing protein |
Protein accession | YP_001562902 |
Protein GI | 160897320 |
COG category | [S] Function unknown |
COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGGG CCCCAGGCCC CCTTCTGTCA GAGAAAAAAC ACCCCATGCA AAGCCACACG ATCAAGACCT GGGCCTGGTT GCACAAATGG AGCAGCCTGG TCTGCACCGT CTTCATGCTG CTGCTGTGCC TGACCGGCCT TCCACTGATC TTCCACCACG AAATCGGCCA CCTGCTGGGC ACCGAGGTGG AGGCCCCGCC CATGCCCCAG GGCACGCCCC ATGCCAGCCT GGACAAGGTG CTGGAGGTGG CCCGCGCCCA GCACCCGGAC CGCGTGGTGC AGTTCGTCTC CAAGTCCGAC GACACCGATG ACCTCTGGTT CGTCACCATG ACGCCCACGC CGGCGCCCAC GGACGATTTC CGCTCCGTGG TGGTCGATGC GCGCACGGCC GAACTGCTGG CCCAGCCGCG CTTCGACCAG GGCTTCATGT GGGTCATGTT CAAGCTGCAC GTGGACCTGT TCGCGGGGCT GCCGGGCAAG CTGTTCCTGG GCTTCATGGG GCTGCTGCTG CTGATCGCCA TCGTCAGCGG CGTGGTGCTG TACGCGCCCT TCATGCGCAA GCTCGATTTC GGCACCGTGC GCCGCACGCG CCAGCCGCGC CTGAAGTGGC TGGACCTGCA CAACCTGCTG GGCATCGTCA CCCTGGTGTG GCTGTTCGTG GTGGGCGCCA CCGGCATGAT CAATACCTGG GCCGACCTGC TGATCAAGTA TTGGCAGCAT GACCAGCTCA GCAGCGTGCT GGCGCCCTAC CAGGGCCAGG ACACGGTGCC GGTGGCGGAG CGCGCCTCGC TGCAGCAATC GCTGCAGGCC GCCCAGCAGC AGGTGCCAGG CACCAAGCTG TACTTCATCG CCTTCCCCGG CACCACGTTC TCCAGCCCGC ACCACCACAC CTTCTTCCTG CGCGGCAACG AGCCCCTGAC CTCGCGCCTG TTCCTGCCCG TGCTGGTGGA CGCCAAGACC GCCCAGGTCA CGGCCGCGCC CGCCCTGCCC TGGTATCTGA CGGCGCTGCT GGTGTCCCAG CCGCTGCACT TCGGCGACTA CGGCGGGCGG GCCATGCAGA TCCTCTGGGC GCTGCTGGAC ATCGCCAGCA TCATCGTGCT GGGCACGGGC CTGTACCTGT GGGTCAAAAA GGGCAAGAGC GTGCCGGCCC CGCAGCCCGC GCCGCGCGGC AAGGAGATCA CGGCATGA
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Protein sequence | MAGAPGPLLS EKKHPMQSHT IKTWAWLHKW SSLVCTVFML LLCLTGLPLI FHHEIGHLLG TEVEAPPMPQ GTPHASLDKV LEVARAQHPD RVVQFVSKSD DTDDLWFVTM TPTPAPTDDF RSVVVDARTA ELLAQPRFDQ GFMWVMFKLH VDLFAGLPGK LFLGFMGLLL LIAIVSGVVL YAPFMRKLDF GTVRRTRQPR LKWLDLHNLL GIVTLVWLFV VGATGMINTW ADLLIKYWQH DQLSSVLAPY QGQDTVPVAE RASLQQSLQA AQQQVPGTKL YFIAFPGTTF SSPHHHTFFL RGNEPLTSRL FLPVLVDAKT AQVTAAPALP WYLTALLVSQ PLHFGDYGGR AMQILWALLD IASIIVLGTG LYLWVKKGKS VPAPQPAPRG KEITA
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