Gene Daci_1877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1877 
Symbol 
ID5747434 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2074429 
End bp2075616 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content67% 
IMG OID641296955 
ProductPepSY-associated TM helix domain-containing protein 
Protein accessionYP_001562902 
Protein GI160897320 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGGG CCCCAGGCCC CCTTCTGTCA GAGAAAAAAC ACCCCATGCA AAGCCACACG 
ATCAAGACCT GGGCCTGGTT GCACAAATGG AGCAGCCTGG TCTGCACCGT CTTCATGCTG
CTGCTGTGCC TGACCGGCCT TCCACTGATC TTCCACCACG AAATCGGCCA CCTGCTGGGC
ACCGAGGTGG AGGCCCCGCC CATGCCCCAG GGCACGCCCC ATGCCAGCCT GGACAAGGTG
CTGGAGGTGG CCCGCGCCCA GCACCCGGAC CGCGTGGTGC AGTTCGTCTC CAAGTCCGAC
GACACCGATG ACCTCTGGTT CGTCACCATG ACGCCCACGC CGGCGCCCAC GGACGATTTC
CGCTCCGTGG TGGTCGATGC GCGCACGGCC GAACTGCTGG CCCAGCCGCG CTTCGACCAG
GGCTTCATGT GGGTCATGTT CAAGCTGCAC GTGGACCTGT TCGCGGGGCT GCCGGGCAAG
CTGTTCCTGG GCTTCATGGG GCTGCTGCTG CTGATCGCCA TCGTCAGCGG CGTGGTGCTG
TACGCGCCCT TCATGCGCAA GCTCGATTTC GGCACCGTGC GCCGCACGCG CCAGCCGCGC
CTGAAGTGGC TGGACCTGCA CAACCTGCTG GGCATCGTCA CCCTGGTGTG GCTGTTCGTG
GTGGGCGCCA CCGGCATGAT CAATACCTGG GCCGACCTGC TGATCAAGTA TTGGCAGCAT
GACCAGCTCA GCAGCGTGCT GGCGCCCTAC CAGGGCCAGG ACACGGTGCC GGTGGCGGAG
CGCGCCTCGC TGCAGCAATC GCTGCAGGCC GCCCAGCAGC AGGTGCCAGG CACCAAGCTG
TACTTCATCG CCTTCCCCGG CACCACGTTC TCCAGCCCGC ACCACCACAC CTTCTTCCTG
CGCGGCAACG AGCCCCTGAC CTCGCGCCTG TTCCTGCCCG TGCTGGTGGA CGCCAAGACC
GCCCAGGTCA CGGCCGCGCC CGCCCTGCCC TGGTATCTGA CGGCGCTGCT GGTGTCCCAG
CCGCTGCACT TCGGCGACTA CGGCGGGCGG GCCATGCAGA TCCTCTGGGC GCTGCTGGAC
ATCGCCAGCA TCATCGTGCT GGGCACGGGC CTGTACCTGT GGGTCAAAAA GGGCAAGAGC
GTGCCGGCCC CGCAGCCCGC GCCGCGCGGC AAGGAGATCA CGGCATGA
 
Protein sequence
MAGAPGPLLS EKKHPMQSHT IKTWAWLHKW SSLVCTVFML LLCLTGLPLI FHHEIGHLLG 
TEVEAPPMPQ GTPHASLDKV LEVARAQHPD RVVQFVSKSD DTDDLWFVTM TPTPAPTDDF
RSVVVDARTA ELLAQPRFDQ GFMWVMFKLH VDLFAGLPGK LFLGFMGLLL LIAIVSGVVL
YAPFMRKLDF GTVRRTRQPR LKWLDLHNLL GIVTLVWLFV VGATGMINTW ADLLIKYWQH
DQLSSVLAPY QGQDTVPVAE RASLQQSLQA AQQQVPGTKL YFIAFPGTTF SSPHHHTFFL
RGNEPLTSRL FLPVLVDAKT AQVTAAPALP WYLTALLVSQ PLHFGDYGGR AMQILWALLD
IASIIVLGTG LYLWVKKGKS VPAPQPAPRG KEITA