| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1867 |
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| Symbol | |
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| ID | 5747424 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 2065114 |
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| End bp | 2066028 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296945 |
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| Product | intradiol ring-cleavage dioxygenase |
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| Protein accession | YP_001562892 |
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| Protein GI | 160897310 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.416539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGAAC TGTCCCAGGA CCAGCTGCTG AATCTGGTCA ACAGCAAGCA GATCGCCCCT
GGCAGCGACC GCGTGCGGGC GCTGACCCAG CGCATCGTCA GCGACCTGTT CCACACCATC
GACGAGATGG ATGTCACGCC CGACGAGTTC TGGGCCGCCG TGGACTGGCT GGGCCGCCTT
GGGAGCAGCG GCCAGTTGGG CCTGATCACG GCAGGCCTGG GCTTCGACCG GCTGCTGGAC
ATCCGCAGCG ACGAGGCCGA TGCGCGTGCT GGCCGTGCGG GCGGCACGCC GCGCGCCATC
GAAGGCCCGC TGTTCGTGGC CGGTGCACCG CTGTCGCAAG CCGAAGTGCG CCTGGACGAG
GGCGAGCCCC AGGGCGAGGT CTTCGTGATG GAAGGACGGG TGCTGGACCT TGACGGCCGG
CCTCTGCCGC ATGCGCTCAT CGATGTCTGG CATGCCAATG TGCAGGGCGG CTACTCGCAC
TTCTTCCCGG GCATGAAGCC CTACGAGCTG CGCCGCCGCA TAGAAGCCGA CGACCAGGGC
CGCTACCGCT TTCGCAGCTA TGTGCCGCCC GGCTACTCCA TACCGCCGAA CAGCCCCACC
TCGGAACTGT TCGACGCGCT GGGACGCCAC GGCCATCGTC CCGCCCACAT CCACTTTCTC
GTGGTTGCAC CCGGCATGCG CACGCTGACC ACCCAGGTCA ACCTGCCCGG CGATACCTAC
CTGGACGATG ACTTCGCCTT CGCCACGCGT GACGGCCTGA TCGTCGAGCT GGAGCGCGGC
GTGGCGCCGG CCGGCTATGA GTCGCTGGGC GTGAACGCGC CTTTCGTCCG CACGCGCTTC
GACTTCGTGC TGCAGCCCGC AGTCAGCGAA GGCGAGTCCT TGCCGCTGAC ACGCATGGAG
CGTGTGCGCG CCTGA
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| Protein sequence | MSELSQDQLL NLVNSKQIAP GSDRVRALTQ RIVSDLFHTI DEMDVTPDEF WAAVDWLGRL
GSSGQLGLIT AGLGFDRLLD IRSDEADARA GRAGGTPRAI EGPLFVAGAP LSQAEVRLDE
GEPQGEVFVM EGRVLDLDGR PLPHALIDVW HANVQGGYSH FFPGMKPYEL RRRIEADDQG
RYRFRSYVPP GYSIPPNSPT SELFDALGRH GHRPAHIHFL VVAPGMRTLT TQVNLPGDTY
LDDDFAFATR DGLIVELERG VAPAGYESLG VNAPFVRTRF DFVLQPAVSE GESLPLTRME
RVRA
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