| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1861 |
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| Symbol | |
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| ID | 5747418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 2058042 |
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| End bp | 2060978 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641296939 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001562886 |
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| Protein GI | 160897304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC ACTTGAAGCA AGCCGACTGG GGCACGCCCG CCAGCCCGTC CGAACGCCTG
ATCACCCTGG AGATCGACGG CCGCGAGGTC TGCGTTCCCG AGGGCACCTC GCTGATGCGC
GCTGCCATGG AAGGCGGCGT CAGCGTGCCC AAGCTGTGCG CCACCGACAG CCTGGAGCCC
TTCGGCTCCT GCCGCCTGTG CCTGGTGCAG ATTGAAGGCC GCAAGGGCTT TCCGGCCTCG
TGCACCACGC CGGCCGAGCC CGGCATGAAG GTGCGCACGC AAAGCCCGCA ACTGCAGGAG
CTGCGCCGCG GCGTGATGGA GCTGTACATC TCCGACCATC CGCTGGACTG CCTGACCTGC
AGCGCCAACG GCGACTGCGA ACTGCAGGAC ATGGCCGGCA CGGTGGGCCT GCGCGAGGTG
CGCTACGGCT TCGACGGCGC CAACCATTTC AAGGGCCAGG CGCGGGCCGA GGTCGATGTC
TCCAACCCGT ACTTCAGCTA CGACCCCAGC AAGTGCATCG TCTGCAACCG CTGCGTGCGC
GCCTGCGAGG AGACGCAGGG CACCTTTGCG CTGACCATCT CGGGCCGGGG GTTCGAATCG
CGCGTCACGG CGGGGCAGGG CGGCAGCTTC ATGGACAGCG ACTGCGTCAG CTGCGGCGCC
TGCGTGCAGG CCTGCCCCAC GGCCACGCTG CAGGAAAAGA CCGTGACCGA GCTGGGCCAG
GCCGGGCACA GCGCCATCAC CACCTGCGCC TACTGCGGCG TGGGCTGCGG CTTCAAGGCC
GAGATGAAGG GCGAGCAGGT CGTGCGCATG GTGCCCTGGA AGGACGGCCA GGCCAACGAG
GGCCATGCCT GCGTCAAGGG CCGCTTTGCC TGGGGCTATG CCACGCACAA GGACCGCATC
ACCCGGCCCA TGGTCCGCGC GAAGATCACC GACCCCTGGC GCGAAGTGAG CTGGGAAGAG
GCCATTGCCC ACACGGCCCG CGAGTTCCGC CGCATCCAGG CGAAGCACGG CAAGGATTCC
ATTGGCGGCA TCACCTCCTC GCGCTGCACC AACGAAGAGG CCTACCTGGT GCAAAAGCTG
GTGCGCACGG CCTTCGGCAA CAACAACGTC GATACCTGCG CGCGCGTGTG CCACTCGCCC
ACGGGCTATG GACTGGGCCA GACCTATGGC ACCTCGGCCG GCACGCAGAC CTTCAAGTCC
ATCGAGCACA CGGACGTGGT CATGGTCATC GGCGCCAATC CCACGGCCGC GCACCCGGTG
TTCGGCTCGC GCATGAAAAA GCGCCTGCGC GGCGACGGCC GGCGTGCGGG CGCCAAGCTC
ATCGTCATCG ACCCACGCGA GATCGAGCTC GTCAAGTCAC CCCACATCCG CGCCGACTAC
CACCTGCAAC TGCGGCCCGG CACCAACGTG GCCATGATCA CCTCGCTGGC CCATGTCATC
GTCACCGAAG GCTGGCTGGC CGAGGACTAC ATCGCCGAGC GCTGCGATGC CAAGTCCTTC
GCGCAGTGGA AGGAATTCGT GGCCCGGCCC GAGAACTCGC CCGAGGCCAT GGCCGAGGTC
ACCGGGGTGG CGCCTGACCT GGTGCGCGGC GCCGCGCGCC TGTATGCGCT GGGCGCCGAG
GACCATCCAG CGGGCCGCCC CGTCAACGCG GCCATCTACT ACGGCCTGGG CGTGACCGAG
CATGCGCAGG GCTCGACCAT GGTCATGGGC ATTGCCAACC TGGCCATGGC CACGGGCAAT
GTGGGCCGCG AAGGCGTGGG CGTGAACCCG CTGCGCGGCC AGAACAATGT GCAGGGCTCC
TGCGACATGG GCTCCTTCCC GCATGAGCTG CCCGGCTACC GCCACATCTC GGACAGCACG
GTGCGCGCCG AGTTCGAGGG GGCCTGGGGC GTGGCGCTCA GCCCCGAGCC CGGGCTGCGC
ATTCCCAACA TGTTCGAGGC GGCCCTGGCC GGCAGCTTCA TGGGCCTGTA CTGTGAGGGC
GAGGACATCG TGCAGTCCGA CCCCAACACC CAGCATGTGA CGGCCGCGCT CTCGGCCATG
GAATGCGTGG TGGTGCAGGA CATCTTCCTC AACGAAACCG CCAAGTACGC CCATGTCTTC
CTGCCAGGCG CTTCCTTCCT CGAAAAGGAC GGCACCTTCA CCAATGCCGA GCGCCGCATT
TCGCGCGTGC GCAAGGTCAT GGCGCCGCTG GCCGGCTATG CCGATTGGGA GGTCACCCAG
CTGCTGGCCA ATGCGCTGGG CTACGCCATG CACTACACGC ACCCGAGCGA AATCATGGCC
GAGATCGCCG CGCTCACGCC CAGCTTCGCG GGCGTGAACT ACGACAAGAT CGACCGGCTG
GGCAGCGTAC AATGGCCCTG CAATGACAGC ACCGAAGAGG CCGGCACTTC CATCATGCAC
AGGGACCGCT TCGTGCGCGG CAAGGGCCGC TTCATCATCA CCCAGTACGT GGCCACCGAC
GAGAAGGTCA CCCAGCGCTT TCCGCTGTTG CTGACCACGG GCCGCATCCT GTCGCAATAC
AACGTGGGTG CCCAGACCCG GCGCACGCAC AACAGCCACT GGCACAGCGA GGACCGGCTG
GAAATCCATC CGCATGACGC CGAGGACCGC GGCATACGCG ACGGCGACTG GGTCGGCATC
GCCAGCCGCG CGGGCGAGAC CGTGCTGCGC GCCACCGTCA CCGAGCGCAT ACAGCCCGGC
GTGGTCTACA CCACCTTCCA CTTTCCCGAA TCGGGCGCCA ACGTCATCAC CACCGACAGC
TCCGACTGGG CCACCAACTG CCCCGAATAC AAGGTCACGG CCGTGCAGGT GCTGCCCGTC
CCCCAGCACG CCCAGCCGTC CGACTGGCAG CGCGGCTTTG CGCGCATGCA CGAAGAGCAG
ATCGGCCTGT TGCAAGCCGC GCAGGCAGGC AGCATGGCCG TGGCGGGAGG CAAGTGA
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| Protein sequence | MLDHLKQADW GTPASPSERL ITLEIDGREV CVPEGTSLMR AAMEGGVSVP KLCATDSLEP
FGSCRLCLVQ IEGRKGFPAS CTTPAEPGMK VRTQSPQLQE LRRGVMELYI SDHPLDCLTC
SANGDCELQD MAGTVGLREV RYGFDGANHF KGQARAEVDV SNPYFSYDPS KCIVCNRCVR
ACEETQGTFA LTISGRGFES RVTAGQGGSF MDSDCVSCGA CVQACPTATL QEKTVTELGQ
AGHSAITTCA YCGVGCGFKA EMKGEQVVRM VPWKDGQANE GHACVKGRFA WGYATHKDRI
TRPMVRAKIT DPWREVSWEE AIAHTAREFR RIQAKHGKDS IGGITSSRCT NEEAYLVQKL
VRTAFGNNNV DTCARVCHSP TGYGLGQTYG TSAGTQTFKS IEHTDVVMVI GANPTAAHPV
FGSRMKKRLR GDGRRAGAKL IVIDPREIEL VKSPHIRADY HLQLRPGTNV AMITSLAHVI
VTEGWLAEDY IAERCDAKSF AQWKEFVARP ENSPEAMAEV TGVAPDLVRG AARLYALGAE
DHPAGRPVNA AIYYGLGVTE HAQGSTMVMG IANLAMATGN VGREGVGVNP LRGQNNVQGS
CDMGSFPHEL PGYRHISDST VRAEFEGAWG VALSPEPGLR IPNMFEAALA GSFMGLYCEG
EDIVQSDPNT QHVTAALSAM ECVVVQDIFL NETAKYAHVF LPGASFLEKD GTFTNAERRI
SRVRKVMAPL AGYADWEVTQ LLANALGYAM HYTHPSEIMA EIAALTPSFA GVNYDKIDRL
GSVQWPCNDS TEEAGTSIMH RDRFVRGKGR FIITQYVATD EKVTQRFPLL LTTGRILSQY
NVGAQTRRTH NSHWHSEDRL EIHPHDAEDR GIRDGDWVGI ASRAGETVLR ATVTERIQPG
VVYTTFHFPE SGANVITTDS SDWATNCPEY KVTAVQVLPV PQHAQPSDWQ RGFARMHEEQ
IGLLQAAQAG SMAVAGGK
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