Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1856 |
Symbol | |
ID | 5747413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2052406 |
End bp | 2053722 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641296934 |
Product | major facilitator transporter |
Protein accession | YP_001562881 |
Protein GI | 160897299 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCTA CATACATTTC GGTGGAAAAA GGCATCCAGA CAGCGGGTGT CGGCAAGTTC CAATATCGGC TGTTCGTCAT CTTCGGGCTG GTCTGGCTGG CCGATGCCAT GCAGGTGCTG TCCATCGGCT TCAGCGCGCC GTCCATTGCC AAGACCTTCG GCAAGACCGT GCCCGAGGCG CTGCAGACCG GCACCTTCTT CTTCATCGGC ATGCTGATCG GCGCCTTCGT CTTCGGCCGC CTGGCCGACC GCATCGGGCG CCGCCCGGTG CTGATGATGG CCGTGGTGAT CGACGCCTTT GCGGGCGTGG CCTCGGCCTT TGCGCCCGAG TTCGCCTGGC TGCTGGTGCT GCGCTTCATC ACCGGCATCG GCGTGGGCGG CACGCTGCCC GTGGACTACA CCATGATGGC CGAGTTCCTG CCCAGCGACC GCCGCGGCCG CTGGCTGGTG CTGCTGGAAT CGTTCTGGGC CGTGGGCACC ATCTTCCTGG CCATCCTGGC GCTGGTGGCC GTGTCCTGGG GTGACGATGC CTGGCGCGTG ATCTTCTTCG TGACCGGACT GCCGGCGCTG ATCGGCGTGG TGCTGCGCTT CTACATCCCC GAGTCGCCCA TGTTCCTCAA CCGCAACGGC AAGTCCGAGG AGGCGCGCAA GGTGCTGCAG CGGGTGGCCA AGGTCAACGG CACCACCGCG GAAATCCCCG CCCTGCAGCC TGAAAAGCAG GAGCGCAAAT CCATCCTCGC GCTGTTCAAC GGCGACCTGC GCCGCCGCAG CCTCTCGCTG TTCCTGGCCT GGGCGCTGAT CTCCATCGCC TACTACGGTG TCTTCGTCTA CCTGCCCGTC AAGCTCAGCA GCGAGGGCTT CGCCTTCATG CGCGGGCAGG TCTTCCTGGT GGTGCTGGCC CTGGTGCAAC TGCCCGGCTT TGCGCTGTCG GCCTATGGCG TGGAGCGCTG GGGCCGCAAG CCCACGCTGA TCGGCTTTTT GCTGCTCAGC GCCGTCGGCT GCATGTTCTA CAGCCTGGGC TCGTCGCCCT TCGTGGTCAT CGGCTCCACC CTGCTGATGA GCTTCTCGCT GCTGGGCACC TGGGGCGCGC TGTATGCCTT CACCCCCGAG GTCTACCCCA CCGACCTGCG CGCCAGCGGC ATGGGCATGG CCGGCGCCGT GGCGCGCTTC GGCGGCCTGT TCGCCCCGGC CATCATTGCG CCCATCATGG CCACCCACTT CACACTGGCC CTGGCCGTGC TGTCCGCCAT GCTGGTGGGC GGCGCCCTGT CGATCTGGGC CGTGGATGTG GAATCGCGCA ACCGGGCGCT GGATTGA
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Protein sequence | MSSTYISVEK GIQTAGVGKF QYRLFVIFGL VWLADAMQVL SIGFSAPSIA KTFGKTVPEA LQTGTFFFIG MLIGAFVFGR LADRIGRRPV LMMAVVIDAF AGVASAFAPE FAWLLVLRFI TGIGVGGTLP VDYTMMAEFL PSDRRGRWLV LLESFWAVGT IFLAILALVA VSWGDDAWRV IFFVTGLPAL IGVVLRFYIP ESPMFLNRNG KSEEARKVLQ RVAKVNGTTA EIPALQPEKQ ERKSILALFN GDLRRRSLSL FLAWALISIA YYGVFVYLPV KLSSEGFAFM RGQVFLVVLA LVQLPGFALS AYGVERWGRK PTLIGFLLLS AVGCMFYSLG SSPFVVIGST LLMSFSLLGT WGALYAFTPE VYPTDLRASG MGMAGAVARF GGLFAPAIIA PIMATHFTLA LAVLSAMLVG GALSIWAVDV ESRNRALD
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