Gene Daci_1854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1854 
Symbol 
ID5747411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2048508 
End bp2049065 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content70% 
IMG OID641296932 
Product2Fe-2S iron-sulfur cluster binding domain-containing protein 
Protein accessionYP_001562879 
Protein GI160897297 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.771185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAACCC CAGTCCATCC AAGCAGTACC CCCAGCCCCA TCCGCCTGCA GGTCAATGCA 
CGCGCATGCG AGGTGCCGGC AGCGCCCGGG ACGGCGCTGC TGCATGTGCT GCGCAATGAC
CTGGAGCTGA ACGGGCCCAA GTACGGCTGC GGCCTGGGCG AATGCGGCGC CTGCACGGTG
CTGATCGATG GCGTGGCCGC GCGTTCCTGC GTGATCCCCG TGCGGGCGGC CGTGGGCCGC
GAGGTCACCA CGCTGGAAGG CCTGGGCTCG CGCCAGTGCC CCGGCCCCAC GCAGCAGGCC
TTCATCGACT GCCAGGCGGC CCAGTGCGGC TACTGCCTCA ACGGCATGAT CATGACCGTG
GAGGCCCTGC TGCGCCGCAA CCCCAATCCC ACCGAGCAAG AGTTGCGCAA CGAGCTGCAC
CACAACCTGT GCCGCTGCGG CACGCATGTG GAAATCATGC AGGCCGCCCT GCGCGCCGTG
CAGCTGCGTG CGCAACGCGC CGCGCTGCAG GCACCCTCCG GTTTTCCATC TTCCAGCGCG
GGCGAGGTCC AGCCATGA
 
Protein sequence
MGTPVHPSST PSPIRLQVNA RACEVPAAPG TALLHVLRND LELNGPKYGC GLGECGACTV 
LIDGVAARSC VIPVRAAVGR EVTTLEGLGS RQCPGPTQQA FIDCQAAQCG YCLNGMIMTV
EALLRRNPNP TEQELRNELH HNLCRCGTHV EIMQAALRAV QLRAQRAALQ APSGFPSSSA
GEVQP