Gene Daci_1848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1848 
Symbol 
ID5747405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2040989 
End bp2043331 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content72% 
IMG OID641296926 
Productaldehyde oxidase and xanthine dehydrogenase molybdopterin binding 
Protein accessionYP_001562873 
Protein GI160897291 
COG category[C] Energy production and conversion 
COG ID[COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGC CCCAGCCCCA AGCCCTGCAC GCACAGCTGC TCACGCGCGC CGACACCCTG 
CTCGTGGTGC GCCAGCCCGT GGCGCCGCCG CGCCCTGCGC CCGGCCAGCC CGGCACGGCC
ACCGACTATG TGCAGTCCAC GCCCGAGGTC TTCGTGGCCG TGCTGGCCGA CGAAGCCGCG
CCCCAGGGCT GGCGCGCCCT GGCCTTCAAC GGCCATGTGG ACCTGGGCAC GGGCATACGC
ACGGCCCTGG CGCAGATCGT GGCGGAAGAG CTCGAAGTGC CTTTGGCGCG CCTGGACATG
GTGCTGGGCC ACACGGCCGC CGCGCCCAAC CAGGGCCCGA CCATTGCCAG CGCCAGCATC
CAGATCTCGG CCGTGCCGCT GCGCCGCGCC GCCGCCCAGG CGCGCGAGCA GCTGCTGGCG
CTGGCCGCGC AGCAATGGAG CGTGGCGGCG GACCGGCTCC AGGCACGGGA TGGCGCGGTG
CGCTTTGCCG ATGGCAGCGA TGCCCGCGAA CTCGGCTATG GCGATCTGCT GCGCGGCCAG
CAACTGCAGC TGACGCTGGC CCCGCCGGAT CAGGAAGTGA AGCTCAAGCC CGCCAGCGAA
TACCGGCTCG TCGGCCGTGG CGCGGCGCGC GTGGACATCC CCGCCAAGGC CACGGGCGAG
CTGAGCTTTG TGCACGATGT GCGCGTGCCC GGCATGCGCC ATGGCCGCGT CATCCGCCCT
CCGCACCCGG GCCGCGACGG CGGCGATTTC ATCGGCCGCT GCCTGGTGGC CGTGGAGCGC
GACTCCGTGG CCCACCTGCC CGGCAACGTG CAGGTGGTCA CCGAGGGCGA CTTCGTCGGC
GTGGTCGCCG ACCGCGAGGA ACAGGCCATT GCCGCCATGC GCGCGCTGCG CGTGCAATGG
CAGGCCGTGC CGCCGGCGCC CGATCTGTCT GACTTGGCCG CAGCCATCCG CGCCAATCCT
GCCCAACACC GTGCGCTGGT GGACCAGGGC ACTGTGGACG ATGCCTTCGC GGGCGTCGGC
ACGGGTGCGG CCACCGAACT GCGCCGCAGC TACGTCTGGC CCTACCAGAT GCATGCCTCC
ATCGGCCCGT CCTGCGCCGT GGCCGATTTC AGCGGGGGCC GTCTCAAGCT CTGGGCCGGC
ACGCAGAACC CCCACATGCT GCGCACCGAC CTGGACCGCC TGCTGCAATT GGGCGAGGAC
CGCATCGAGA TCGTGCGCCT GGAGGCGGCC GGCTGCTACG GCCGCAACTG CGCCGACGAT
GTCTGCGCCG ACGCCGCCCT GCTGTCCATG GCCGTGGGTG CGCCCGTGCG CGTGCAGCTC
ACGCGCGAGC AGGAACACCA GTGGGAGCCC AAGGGCACGG CCCAGCTCAT GGACGTGAGC
GCGGCCATCG ATGCCCGGGG CGAACTGCTG GCCTACGACT TTGCCGTGCG CTACCCCTCC
AACGACGCGC CGCTGCTGGC CCTGCTGCTC ACCGGCCGCA TCCCGGGCGA GCCGCGCACG
CTGGAGATGG GCGACCGCAC CGCCGTGCCG CCCTACCGCT ACGCCAGCCA GCGCATCACC
TGCCATGACA TGGCGCCCAT CGTGCGCTCA TCCTGGCTGC GCGGCGTCTC GGCCCTGCCC
AATTCCTTTG CCCACGATTG CATGATCGAC GAGCTGGCCC ATGCGGCCGG CGCCGACCCC
GTGGACTACC GTGTTCGCCA CCTCGATGAC CCGCGCGCCG TCGAGTTGAT CGAGGCCACG
GCACGCCACG CGGGCTGGCA GCAAAACCAG CCGGGAAGCC GGGGCCGCCC CGGCGCCGAC
GGCCTGCTGC ACGGGCGCGG CGTGGCCTAT GCGCGCTACA TCCACAGCCG CTTTCCCGGC
TTCGGCGCGG CCTGGGCCGC CTGGGTCATC GACATCGACG TGGACCCCGC CAGCGGCCGC
ATCACCGTGC GGCGACTGGT CGTGGGCCAG GACACGGGAA TGATGGTCAA CCCCGACGGC
GTGCGCCACC AGATCCACGG CAATGTCATC CAGACCCTGA GCCGCAGCCT GATGGAGAAG
GTCGCCTTCA ATGCGCAAGG CGTGGCCAGC CGCGAGTGGG GCAGCTACCC CATCATCGGC
TTCCGCGACC TGCCTCCCAT CGAAGTGGTG CTGATGCCGC GCCAGGATGA GCCCCCCATG
GGCGCAGGCG AATCGGCCTC GGTCCCCGGC CCGGCCGCGC TGGCCAATGC GCTGTTCGAC
GCCACCGGCC AGCGCTTCTA CGCCGCGCCC TTCACGCCCG ACGTGGTGCG CGCCGCACTG
AATGCCGCGC CGAACGCCAC GCCAGAGACT GCGCTGGCAG GCCAGCGGGC ACAGCCGGCC
TAG
 
Protein sequence
MNLPQPQALH AQLLTRADTL LVVRQPVAPP RPAPGQPGTA TDYVQSTPEV FVAVLADEAA 
PQGWRALAFN GHVDLGTGIR TALAQIVAEE LEVPLARLDM VLGHTAAAPN QGPTIASASI
QISAVPLRRA AAQAREQLLA LAAQQWSVAA DRLQARDGAV RFADGSDARE LGYGDLLRGQ
QLQLTLAPPD QEVKLKPASE YRLVGRGAAR VDIPAKATGE LSFVHDVRVP GMRHGRVIRP
PHPGRDGGDF IGRCLVAVER DSVAHLPGNV QVVTEGDFVG VVADREEQAI AAMRALRVQW
QAVPPAPDLS DLAAAIRANP AQHRALVDQG TVDDAFAGVG TGAATELRRS YVWPYQMHAS
IGPSCAVADF SGGRLKLWAG TQNPHMLRTD LDRLLQLGED RIEIVRLEAA GCYGRNCADD
VCADAALLSM AVGAPVRVQL TREQEHQWEP KGTAQLMDVS AAIDARGELL AYDFAVRYPS
NDAPLLALLL TGRIPGEPRT LEMGDRTAVP PYRYASQRIT CHDMAPIVRS SWLRGVSALP
NSFAHDCMID ELAHAAGADP VDYRVRHLDD PRAVELIEAT ARHAGWQQNQ PGSRGRPGAD
GLLHGRGVAY ARYIHSRFPG FGAAWAAWVI DIDVDPASGR ITVRRLVVGQ DTGMMVNPDG
VRHQIHGNVI QTLSRSLMEK VAFNAQGVAS REWGSYPIIG FRDLPPIEVV LMPRQDEPPM
GAGESASVPG PAALANALFD ATGQRFYAAP FTPDVVRAAL NAAPNATPET ALAGQRAQPA