Gene Daci_1836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1836 
Symbol 
ID5747393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2030692 
End bp2031057 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content66% 
IMG OID641296914 
Product6-pyruvoyl tetrahydropterin synthase/hypothetical protein 
Protein accessionYP_001562861 
Protein GI160897279 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.248531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTCA CCGTACACCA GCGCTTTTTC TTCGATGCCG CCCACACGCT GGAGCGCGCC 
ATCGAGACCG AGAGCAGCCG CCGCATCCAC GGCCACACCT ACTACGCCGA GGTCAGCGTC
ACCGGCCCGC GCAATCCGGA CAACGGCATG GTGATCGACC TGGGCTACCT GCGCTCGCGC
CTGAAGACCC TGGGCGACGC GCTGGACCAC CGCTTTCTCG ACGAAATCCC CGGCCTGGGC
AAGCCCACGC TGGAAAACCT GTGCCTGTTC ATTGCCGATT CCCTGGCCGA CCTGCAGCCC
GCTCCCAGCC GCATCCGCGT ATGGCGCGAC AGCATCGGCG ATGGCTGCGT GCTCGACCTG
AACTGA
 
Protein sequence
MQFTVHQRFF FDAAHTLERA IETESSRRIH GHTYYAEVSV TGPRNPDNGM VIDLGYLRSR 
LKTLGDALDH RFLDEIPGLG KPTLENLCLF IADSLADLQP APSRIRVWRD SIGDGCVLDL
N