Gene Daci_1830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1830 
Symbol 
ID5747387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2025863 
End bp2026501 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content74% 
IMG OID641296908 
ProductDTW domain-containing protein 
Protein accessionYP_001562855 
Protein GI160897273 
COG category[S] Function unknown 
COG ID[COG3148] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGCCG TGAGCACCCG CGCACGCTGC GCGCAATGCC TGCGCCCTGA GCGCACCTGC 
CTGTGCCCCC TGGTGCAGCC GGTGCCGCAT GCGGTGCAGC TGCTGGTGCT CCAGCATCCC
GAGGAAGAAC TGCAGGCCAA GGGCACGGGC CGGCTGCTGC ACCTGTGCCT GCCCGCCAGC
CGCCTGGCGG TGGGCGAGGC CTTCGAGCCA GCGCAGTTGC AGGCACTGCT GCACGCGCCC
TGGCAGGCCG GCGACGCCCC GCGGCAGGCC GTACTGCTCT ATCCGGAAAC ACCGCACGGC
GACCAGTTGG GCCTGGCCAG GCAAGCGCCC TGGCCGCAGC CCGCGCCATG CCCCGAGGAC
CTGCGCCTGG TGGTGCTGGA CGCCACCTGG CGCAAGAGCC GCAAGATGCT CTACCTCAAC
CCCGGCCTGC AGGCCCTGCC GCGCCTGGCA CTGCAGGGCG ACCTGCCCGC CTCGCGCTAC
GGCGCCCTGC GCAAGGCCCA TGCGCCGGGC CAGCTGTCCA CGCTGGAGGC AGCGGTCTGC
GCGCTGCAAC GGCTGGCGCC TGCCGGCCCG TCGCTGCAGC CGCTGCGCGA CGCGTTCGAG
GGGCTGCTGG CCCTGCATGC CCTGCACAGG CCCGAATGA
 
Protein sequence
MSAVSTRARC AQCLRPERTC LCPLVQPVPH AVQLLVLQHP EEELQAKGTG RLLHLCLPAS 
RLAVGEAFEP AQLQALLHAP WQAGDAPRQA VLLYPETPHG DQLGLARQAP WPQPAPCPED
LRLVVLDATW RKSRKMLYLN PGLQALPRLA LQGDLPASRY GALRKAHAPG QLSTLEAAVC
ALQRLAPAGP SLQPLRDAFE GLLALHALHR PE