Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1822 |
Symbol | panB |
ID | 5747380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2017510 |
End bp | 2018391 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641296902 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001562849 |
Protein GI | 160897267 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.244764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAG CACCCGTCAC CGCCGGCACG CCCTACGGCA CCATCCCTCC CGCCTCGCCG CTGCCCCAGC GCCGCCCCGT GAGCCTTCCG CGCCTGGCGC AGATGCGCGA GGCCGGCGAG AAGATCACCA TGGTCACCGC GTATGACGCC ACATTCGCGG CCGTGGCCGA TGCGGCCGGC GTGGAGTGCA TCCTGGTCGG TGATTCGCTG GGCATGGTCT GCCAGGGCCT GCACAGCACC GTGGGCGTGT CGCTGCAGGA CATGTGCTAC CACACGGCCA GCGTGGCGCG CGGCCTGCAC CGCGTGCAGG GCACGGCCTG GCTGATCGCC GACATGCCCT ATGGCAGCTA CGCCGAAAGC CGCGAGCAGG CCATGCGCAG CGCCTGCGAG CTGATGCAGG CCGGCGCCCA TATGGTCAAG CTCGAAGGCG GCGGCTGGAC CGCGCCCACC GTGCAATTCC TGGTCGAGCG CGGCGTGCCC GTCTGCGCCC ACCTGGGCCT GACGCCGCAG ACCGTGCATG CGCTGGGCGG CTACCGCGTC CAGGGCAAGA GCGACGAGGG CGCGGCCACG CTGCGCCGCC ATGCGCTGGA GCTGCAGGAT GCAGGCGCCT CCATGCTGGT GCTGGAGATG GTGCCGGCAC AGCTGTCGCG CGAACTCACG GCCGAGCTGC CGCACTGCCA CACCATCGGC ATCGGCGCGG GCAGCGGCAC GGCCGGCCAG GTCCTGGTGC TGCACGACAT GCTGGGCGTG AACCTGGGCA AGATGGCCCG CTTCGTGCAC AACTTCATGG CGGATGCGGG CAGCGTCAAA GGCGCCTTCG AGGCCTATGT GCATGCCGTG AAGAACGGCA GCTTCCCCGA CGACAGCAAG CACGCCTGGT AG
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Protein sequence | MTQAPVTAGT PYGTIPPASP LPQRRPVSLP RLAQMREAGE KITMVTAYDA TFAAVADAAG VECILVGDSL GMVCQGLHST VGVSLQDMCY HTASVARGLH RVQGTAWLIA DMPYGSYAES REQAMRSACE LMQAGAHMVK LEGGGWTAPT VQFLVERGVP VCAHLGLTPQ TVHALGGYRV QGKSDEGAAT LRRHALELQD AGASMLVLEM VPAQLSRELT AELPHCHTIG IGAGSGTAGQ VLVLHDMLGV NLGKMARFVH NFMADAGSVK GAFEAYVHAV KNGSFPDDSK HAW
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