Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1812 |
Symbol | |
ID | 5747370 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 2008973 |
End bp | 2010409 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641296892 |
Product | carboxyl-terminal protease |
Protein accession | YP_001562839 |
Protein GI | 160897257 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCCAGA AAATCAAAAT TGCCGGCTGG GTTTCCGTAG GCGTAATCGC CGGAGCACTG ACCACGGTTT CCTTGCAGAC CGTGGCCCGC GGTGCCATGA CCCCGCTGCC GCTGGAGGAA ATCCAGCAGC TGTCCGCCGT CTTCGGCCTG ATCAAGACCG ACTATGTCGA GCCGGTCGAT GACAAGAAGC TGATCACCGA TGCCATCTCC GGCATGGTGT CCAGCCTCGA TCCGCATTCG CAGTACTTCG ACAAGAAGTC CTACAAGGAA TTCCGCGAGG GCACCTCGGG CCGCTTCGTC GGCGTGGGCA TCGAGATCAC GCAGGAAGAC GGCCTGATCA AGGTCGTCTC GCCCATCGAA GGCTCCCCCG CCTTCCGCGC CGGCCTCAAG ACGGGCGACC TGATCACCAA GATCGACGAC ACGGCCGTCA AGGGCCTGTC GCTCAACGAC GCCGTCAAGC GCATGCGCGG CGAGCCCAAC ACCAAGGTGC AGCTGACCAT CCTGCGCAAG GATGAAAGCC GCAGCTTCCC CGTGACCATC ACGCGCGAAG AAATCAAGAC GCAGTCCGTC AAGGGCAAGG TGATCGAGCC CGGCTACGGC TGGATCCGCC TGAGCCAGTT CCAGGAACGC ACGGTGGACG ACTTCGTGCG CAAGGTCGAG GAACTGTACA AGCAGGACCC CAACATGAAG GGCCTGGTTC TGGACCTGCG CAACGACCCG GGTGGCCTGC TGGACGCTGC CGTCGCCATC TCGGCCGCCT TCCTGCCGCC GGATGTGACC GTGGTCTCCA CCAACGGCCA ACTGGCCGAG AGCAAGGAAA CCTACAAGGC ATCGCCCAGC TTCTATGCCC GCCGCGGCAT GGGTGACCCG CTGCAGCGCC TGCCCGCCTC GCTCAAGAAG CTGCCGCTGG TGGTGCTGGT CAACGAAGGC TCGGCCTCGG CCAGCGAGAT CGTGGCCGGC GCACTGCAGG ACCACAAGCG CGCCATCATC ATGGGCAGCC AGACCTTCGG CAAGGGCTCC GTGCAGACCG TGCGCCCCCT GGGCCCCGAT ACGGGCCTGA AGCTGACCAC GGCGCGCTAC TACACGCCCA GCGGCAAGTC CATCCAGGCC AAGGGCATCG TGCCCGACGT GATGGTGGAT GAGACGCCCG AAGGCGACCT GTTCGCCGCC CTGCGCATGC GCGAGGCCGA CCTGGAAAAG CACCTGTCCA GCGGACAGGG TGCCGAGGTC AAGGACGAGG TGCGCGAGAA GGCCCGCGAG GAAGCCCGCA AGCGCCTGGA AGAGGAAGCC AAGAAGCCGC CGGCCGAGCG CCGCCTGCCC GAGTTCGGCA CCGAAAAGGA CTTCCAGCTG CAGCAGGCGC TCAACCGCCT CAAGGGCCAG CCCGTCATGG TCAGCAAGAC CCTGACCGAG CGCGAGCCCG AGAAGAAGGA AAACTGA
|
Protein sequence | MGQKIKIAGW VSVGVIAGAL TTVSLQTVAR GAMTPLPLEE IQQLSAVFGL IKTDYVEPVD DKKLITDAIS GMVSSLDPHS QYFDKKSYKE FREGTSGRFV GVGIEITQED GLIKVVSPIE GSPAFRAGLK TGDLITKIDD TAVKGLSLND AVKRMRGEPN TKVQLTILRK DESRSFPVTI TREEIKTQSV KGKVIEPGYG WIRLSQFQER TVDDFVRKVE ELYKQDPNMK GLVLDLRNDP GGLLDAAVAI SAAFLPPDVT VVSTNGQLAE SKETYKASPS FYARRGMGDP LQRLPASLKK LPLVVLVNEG SASASEIVAG ALQDHKRAII MGSQTFGKGS VQTVRPLGPD TGLKLTTARY YTPSGKSIQA KGIVPDVMVD ETPEGDLFAA LRMREADLEK HLSSGQGAEV KDEVREKARE EARKRLEEEA KKPPAERRLP EFGTEKDFQL QQALNRLKGQ PVMVSKTLTE REPEKKEN
|
| |