Gene Daci_1811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1811 
Symbol 
ID5747369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2008144 
End bp2008896 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID641296891 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_001562838 
Protein GI160897256 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG ATCAACTGCT GCGCTACTCG CGCCACATCC TTCTCGACGA AATCGGCATC 
GAGGGCCAGG AGCGCATCCT GGCCGCGCAT GTGCTCATCA TCGGCGCAGG CGGCCTGGGC
GCGCCCGCCG CGCTGTACCT GGGCTCGGCC GGCATAGGCC GCATCACCCT GGTGGACGAC
GATGCGGTGG ACATGACCAA CCTGCAGCGC CAGATCGCGC ACACCACGGA CCGCGTGGGC
CAGCCCAAGG TGGAATCCAT ACGCACGGCC GTGCACGCCA TCAACCCCGG CATCCGCATC
GACTGCCGCC AGCAGCGCGC CGACGACGCG CTGCTCGACG AGCTCGTGCC GCAGGCCAGC
CTGGTGCTGG ACTGCACGGA CAACTACCGC ACGCGCCACA TGATCAACGC GGCCTGTGTG
CGGCACAAGG TGCCCCTGGT GGCGGGGGCG GCCATCCGGC TGGACGGCCA GCTCATGGTC
ATGGACCCGC GCGACGAGAA CTGCGCCTGC TATGCCTGCG TGTTTCCGCC CGACGCGCAG
TTCGAGGAAG TGCAGTGCTC GACCATGGGC GTCTTCGCGC CCGTGGTGGG CGTCATGGGC
ACGCTGCAGG CGGCGGAAGC CCTCAAGCTG ATCGCGGGAT TTGGCACGCC TGCAACAAAC
CGCCTGACCA TGTTCGACAG CCGCAGCCTG GATTGGAGTA GCATGCAAAC CACTCGTGTA
CCGGAATGTC CCGTTTGCGG TAACAAGGCG TAG
 
Protein sequence
MNDDQLLRYS RHILLDEIGI EGQERILAAH VLIIGAGGLG APAALYLGSA GIGRITLVDD 
DAVDMTNLQR QIAHTTDRVG QPKVESIRTA VHAINPGIRI DCRQQRADDA LLDELVPQAS
LVLDCTDNYR TRHMINAACV RHKVPLVAGA AIRLDGQLMV MDPRDENCAC YACVFPPDAQ
FEEVQCSTMG VFAPVVGVMG TLQAAEALKL IAGFGTPATN RLTMFDSRSL DWSSMQTTRV
PECPVCGNKA