| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1804 |
|---|
| Symbol | |
|---|
| ID | 5747362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | - |
|---|
| Start bp | 2002665 |
|---|
| End bp | 2003786 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641296884 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001562831 |
|---|
| Protein GI | 160897249 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTCT TCAACTGCGA TGCCTGTGGC CACCCGGTCT TCTTCGACAG CGTTCAATGC
GTGCACTGCG GCGCCACCTT GGCCTTCCTG CCCGAGCAAT TGCATGTGGC CTGCCTGCGC
CCGGTTTCCG GCACGCGGGA CAGCGTGCTG TGGGAGAGCC TGTCCTCGCT GACGAGCGGC
AAGCCGCCAG GCCGGCTCTA CAAGATGTGC AGCCACCGGG GTCCCGTGGG ACAGTGCAAC
TTCGCCCTGC CCGCAGACGA TCCCCATGCG CTGTGCGAGT CCTGCCGCCA GACACGCTGG
CTGCCCGATC TGTCAGACCC GTCCAATGCG CTGCGCTGGA CCCGGATCGA GGCCGCCAAG
CGCCAGCTGT TCTACACGCT GGCCCGCCTG GGCCTGGGTC CCCGGCCTGG AGAGGATGGG
CCGCGCTTCG AGCTGCTGGC CGACCTGCCG GGGCAGGCGC CCGTGATGAC CGGCCATGCC
AACGGCACCA TCACGCTGAA CGTGGTGGAG GCCGACGATG CCGAGCGTGC CCGGCGCCGC
CAGGCCCTGC ACGAGCCCTA CCGGACGCTG GTGGGCCATC TGCGCCATGA ATCCGGCCAC
TTCTTCTGGG ACAGGCTGGT GGTGGGCGCG GGCCGTATCG AGGAATTCCG CCGCCTGTTC
GGCGACGAGC GCCAGGACTA TGGCCAGGCC CTGCAGAACT ACTATGCGCG CAACCCGATG
GATGAGCAGT GGCGCGACAA CTTCGTCAGC GCCTATGCCA CCTCCCATCC GTGGGAAGAC
TGGGCCGAAA GCTGGGCCCA TTACCTGCAC ATGGTGGATC TGCTGGAGAC TGCGGCCAGC
TATGGCACCT GCATCACCAT GCCTGGAGGC TCAGGGACAA GTACAGGCTC GGTCACGCAG
CCCGCGCTGT GCGTGCAGGA CCCTTTCGCG GTCCATGCAA GGCCGGACTT CGGCACCATG
CTGGACCAGT GGGTGCCTCT GACGCTGCTG ACCAACAGCC TCAACCGCAG CCTGGGCCAT
GGCGATGCCT ATCCGTTCGC ACTTTCGGCC GGGGCCAGGC GCAAGCTGGA ATTCGTGCAC
GCCGCCGTGA ATGCGAGCGC CACGCGGCAG GCTGCCTTCT AA
|
|---|
| Protein sequence | MRVFNCDACG HPVFFDSVQC VHCGATLAFL PEQLHVACLR PVSGTRDSVL WESLSSLTSG
KPPGRLYKMC SHRGPVGQCN FALPADDPHA LCESCRQTRW LPDLSDPSNA LRWTRIEAAK
RQLFYTLARL GLGPRPGEDG PRFELLADLP GQAPVMTGHA NGTITLNVVE ADDAERARRR
QALHEPYRTL VGHLRHESGH FFWDRLVVGA GRIEEFRRLF GDERQDYGQA LQNYYARNPM
DEQWRDNFVS AYATSHPWED WAESWAHYLH MVDLLETAAS YGTCITMPGG SGTSTGSVTQ
PALCVQDPFA VHARPDFGTM LDQWVPLTLL TNSLNRSLGH GDAYPFALSA GARRKLEFVH
AAVNASATRQ AAF
|
|---|
| |