Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_1802 |
Symbol | |
ID | 5747360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 2001205 |
End bp | 2001915 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641296882 |
Product | methyltransferase |
Protein accession | YP_001562829 |
Protein GI | 160897247 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0742] N6-adenine-specific methylase |
TIGRFAM ID | [TIGR00095] RNA methyltransferase, RsmD family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.218305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCGCA ACAGCATCAA AATTCACACC CCTGCCGGCA AGCGCTGGCT GGAAAAGGCC ACGGCCGAGG CCGCAGCACC CAAGGCAGCT GCCGCAGCGC CTGCTGCCGC CAAGGCGAAA GCCGGACGGC CGGCGCCGGT GGGCGCGGGC GAGGTCCGCA TCATCGGCGG CCAATGGCGC CGCACGCGGC TGCCCGTGGC GCAGCACCCG GGCCTGCGGC CCACGCCGGA TCGCGTGCGC GAGACCCTGT TCAACTGGCT GGGCCAGGAC CTGACGGGCT GGCACTGCCT GGATGCCTTC GCGGGCACGG GCGCGCTGGG CTTCGAGGCC GCATCGCGCG GCGCGACCAA TGTGCTGATG AACGAGCAGG ACGCCACCCT GGTCCAGCAG TTGCAGCGCC TGCGAGAGCG CCTGGACGCC CAGTCCGTGC GCGTGCTGCG CGGCGATGGC ATCGGCTGCC TGCGCCAGGT GGCGCCGGGC ACGCTGGACC TGGTGCTGAT CGATCCGCCG TTCGACCATG CCGATCTGTT CGAGCCTGCG CTGAAGGCCG CCGCGCAGGC GGTGTCCGCC ACGGGCTATG TCTATCTGGA GGCGCCCCAG GCCTGGACCG AGGAGCAACT GGCCGAGGCC GGTGGCCTGC AGCTGTTCCG CCATCTGAAG GCGGGCGCCG TCCACGCCCA CCTGCTGCGC AAGGCACCGC AGGACGAGTA A
|
Protein sequence | MSRNSIKIHT PAGKRWLEKA TAEAAAPKAA AAAPAAAKAK AGRPAPVGAG EVRIIGGQWR RTRLPVAQHP GLRPTPDRVR ETLFNWLGQD LTGWHCLDAF AGTGALGFEA ASRGATNVLM NEQDATLVQQ LQRLRERLDA QSVRVLRGDG IGCLRQVAPG TLDLVLIDPP FDHADLFEPA LKAAAQAVSA TGYVYLEAPQ AWTEEQLAEA GGLQLFRHLK AGAVHAHLLR KAPQDE
|
| |