Gene Daci_1798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1798 
Symbol 
ID5747356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1995865 
End bp1996854 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content69% 
IMG OID641296878 
Producthypothetical protein 
Protein accessionYP_001562825 
Protein GI160897243 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.379878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCCC CCACCTTGCT CGGCGCTGCC GCCCTGCTGG CAGCAGCCGC ATGCCAGAGC 
GCCCTGGCCC AGGATGCCGC TGCGCAGCAG CAACTGGCCG CCAAGCCTTT CACCATCGTC
GCGCCCTTTC CGCCCGGCGG CCCGGTCGAT GCGCTGGCCC GCCTGCTGTC CACGGGATTG
GCCGAGCGCT ACAAGCAGAC CTCGGTGGTG GAGAACAAGC CCGGGGCCAA CGGCAATATC
GGCATCGACA TGGTCAAGCG TGCCGCGCCG GACGGCCATA CGCTGTTGGT CGTGCCCCAG
GGCAACCTGA CCATCAATCC CACGCTGCTG GCCAGGCCCG GCTACAGCGT GGAGGCGGAC
TTCGCGCCCG TGGCCTCGCT GGCCAAGGCG GCCAATGTGA TCGCCGTGCA CCCTGGCGTG
CCCGCCAAAA CGGTGCAGGA GCTGGTGGCC CTGTCCAAGG CCAGGCCGGC CACCATCAGC
TATGCCTCGC CCGGCGTGGG CTCCAGCCTG CATCTGGCCG GTGAGCTGTT CAAGCAGCAG
ACCGGCGCCG ACATCCTGCA CGTGGCCTAC AAGGGCACGG CGCCCGGCCT CAACGATGTG
CTGGGCGGCA CGGTGCCGAT GATCGTGGGC AATGTGCCCG CGCTGCTGCC GCATGTGCAG
TCGGGCAAGC TGCGCGCGCT GGCCGTGACC GACCCGGCGC GCAGCAAGTA CCTGCCTGAT
GTGCCCACGC TGGCCCAGGC GGGCGTGCCG GGCATTGCCA TCTCGTCCTG GTACGGCGTG
ATGGCGCCCA GGAAGACGCC GCCGGCCGTG CTCAAGCAGC TGGAGAAGGA TATTCAGGAG
ATCTTCAACA CGCCGGCCGT GGTCAGGCAG CTGGACCTGC AGGGGATCGA GCCCTGGGTG
GTCACGGGCA GCGCCTTCGG CGAGCTGATC CGCAAGGAGA CAGCGACCTG GGTGCCCGTG
ATCAAGGCCG CCAACGTCAC GCCGCAGTGA
 
Protein sequence
MKAPTLLGAA ALLAAAACQS ALAQDAAAQQ QLAAKPFTIV APFPPGGPVD ALARLLSTGL 
AERYKQTSVV ENKPGANGNI GIDMVKRAAP DGHTLLVVPQ GNLTINPTLL ARPGYSVEAD
FAPVASLAKA ANVIAVHPGV PAKTVQELVA LSKARPATIS YASPGVGSSL HLAGELFKQQ
TGADILHVAY KGTAPGLNDV LGGTVPMIVG NVPALLPHVQ SGKLRALAVT DPARSKYLPD
VPTLAQAGVP GIAISSWYGV MAPRKTPPAV LKQLEKDIQE IFNTPAVVRQ LDLQGIEPWV
VTGSAFGELI RKETATWVPV IKAANVTPQ