Gene Daci_1765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1765 
Symbol 
ID5747323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1963230 
End bp1963931 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content72% 
IMG OID641296845 
Productmalonate decarboxylase, gamma subunit 
Protein accessionYP_001562792 
Protein GI160897210 
COG category 
COG ID 
TIGRFAM ID[TIGR03134] malonate decarboxylase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.928487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATGGA ACACACTTGC CGAGCACCTG TTCGGCCCGG GCCACCAGAT CCACGCCAAC 
GGCGATTTCC TCGAAGGCCA CGCCGTGTTC GATGGCCAGA CCCTCGCCAT CGTCGGCACC
ACGGGCCACG CGCCCATCGG CGTGCGGCTG GCCCTGGCCC AGGCCCGCGT GGTGCTGGAG
ACGGTCGGCG CGCACCCTGG CCGCCCCATC GTGCTGCTGA TCGACACGCA GGGCCAGCAA
CTGCGCCGCC ATGACGAGCT GCTGGGCATC AACCGCGCCA TGGCCCACCT GGGCACCTGC
ATCGACCTGG CACGGCGCCG GGGCCACCGC GTCATCGGCC TGGTCTATGA CCAGGCGCTG
TCGGGCGGCT TCATCACCTC GGGCCTGATC GCCGATGCCT GCTACGCCCT GCCCGAGGCC
GAGATCCGCG TGATGCGCAT CCCCGCCATG TCGCGCATCA CCAAGCTGCC CGAGTCCCTG
CTCAATGCCC TGTCCGAGTC CAACCCGGTG TTCGCCCCCG GCGTGGGCAA CTACGTGGCC
ATGGGCGGCG TGCGCGGCCT GTGGCAAGGC GACCTGCAGG CGGCGCTGCG CGACGCCCTG
GCCCACAGCC CGCGCGAGGA CATGCGCGCC CTGGACGGCG CCGAGCGCGG CGGCCGCAAG
CTGGCCGCCG AGGTGGTGCA GCGCGTCCTG GCCGCTGGAT GA
 
Protein sequence
MQWNTLAEHL FGPGHQIHAN GDFLEGHAVF DGQTLAIVGT TGHAPIGVRL ALAQARVVLE 
TVGAHPGRPI VLLIDTQGQQ LRRHDELLGI NRAMAHLGTC IDLARRRGHR VIGLVYDQAL
SGGFITSGLI ADACYALPEA EIRVMRIPAM SRITKLPESL LNALSESNPV FAPGVGNYVA
MGGVRGLWQG DLQAALRDAL AHSPREDMRA LDGAERGGRK LAAEVVQRVL AAG