Gene Daci_1758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1758 
Symbol 
ID5747316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1954323 
End bp1955114 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content67% 
IMG OID641296838 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001562785 
Protein GI160897203 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.599113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACG AACTGATCCT ACTGAATGTC GCCGACGCGG TGGCGACCCT GACCCTGAAC 
CGCCCCGACA AGCGCAACGC CATGAGTGAC GACATGCGCA CCGAGTTCAT CGATGCCCTG
GAGCGCGTGG CGGCAGACAA GGCCATCAAG GCCCTGGTGC TGACGGGCGC GGGCAAGGGA
TTTTGCGCAG GCGGGGACAT TGCCGGAATG CAAAGGCGCA TGAATGCTCC TGCGGGCGAG
GTGGGCTTCA ACGGCTGGCA GCGCCAGCAG CGCGTGCACC ATGTCCAGGC CCTGCTGCAC
ACCATGCCCA AGCCCGTGAT CGCCGCCGTC AACGGCGCAG CGTCGGGCCT GGGGGCGGAC
ACGGCGCTGG CCTGCGACTT CGTGATCGCC AGCGAATGGG CCAGCTTCGC GTGGAGCTAT
GTGCTGCGCG GCATCATCCC GGACGGCGGC GGCATGTACT TCCTGCCGCG CCGCGTGGGC
CTGGCCAAGG CCAAGGAGCT GATCTTCACG GGGCGCCAGG TCAAGCTGCC GGAAGCCCTG
GCCCTGGGCA TCGTGGACCG CCAGGCCAGT GCCGAGACCT TGGTGGCAGA CGCCCAGGCC
TGGGCGCGCG AGCTGTCCTC GGCTTCTTCC ACCGCGCTGG CATTGACCAA GACCATCCTG
AACCAGAGCT TCGAGCTGTC TTCGCACGAT GTCTTCGCCC AGGGCAGCCA GGCCCAGGGC
ATCTGCTACA CCAGCAGTGA ACACCGCGCA TCGGTGGAGG CCTTCCTGGC CAAGACGGCC
GGCAAGGAGT GA
 
Protein sequence
MNYELILLNV ADAVATLTLN RPDKRNAMSD DMRTEFIDAL ERVAADKAIK ALVLTGAGKG 
FCAGGDIAGM QRRMNAPAGE VGFNGWQRQQ RVHHVQALLH TMPKPVIAAV NGAASGLGAD
TALACDFVIA SEWASFAWSY VLRGIIPDGG GMYFLPRRVG LAKAKELIFT GRQVKLPEAL
ALGIVDRQAS AETLVADAQA WARELSSASS TALALTKTIL NQSFELSSHD VFAQGSQAQG
ICYTSSEHRA SVEAFLAKTA GKE