Gene Daci_1744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1744 
Symbol 
ID5747302 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1938874 
End bp1939359 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID641296825 
Producthypothetical protein 
Protein accessionYP_001562772 
Protein GI160897190 
COG category[S] Function unknown 
COG ID[COG4933] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0334105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.364317 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCC CGCATAACTT CCTGATCTCT CTTGAAGAAC GGCATGCGAA CAGGATTCTG 
CAGGGCACCA AAACCGTTGA GCTCCGTCGT CGGCCTATGC ACGTAGCCCT TGGATCAACG
GTCTGGTTCT ACGTAAAGAT GCCGGTCGGC AGCATCGTCG GCTGCGCCAC TGTCACAGGC
CTGCACACGC TCGCCCCCAG CACACTGTGG AGGCGATTTG GCACCGTATC GGGCCTCAAG
CGCCAAGAAT TTTTCGAATA CTTTTCAGGT ATTTCGAAAG CCTTTGCATT GGGCCTGAGT
GAGCCTACTG AGCTCACGTC CCCCATCCCG CTGAGCAAGC TGCGCGACGT GTCGGGAGGC
TTTCACCCAC CACAGTTCTT CGCCAATGTC GCAAATGATG GACCTTTACT GCACGTGATG
AGCCAAGCTC TTCACGGCAG GCCCGCGACG TCGCAAAATC TGCAGACTGA GCTGGAACTG
GCCTGA
 
Protein sequence
MNAPHNFLIS LEERHANRIL QGTKTVELRR RPMHVALGST VWFYVKMPVG SIVGCATVTG 
LHTLAPSTLW RRFGTVSGLK RQEFFEYFSG ISKAFALGLS EPTELTSPIP LSKLRDVSGG
FHPPQFFANV ANDGPLLHVM SQALHGRPAT SQNLQTELEL A