| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1742 |
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| Symbol | |
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| ID | 5747300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1934933 |
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| End bp | 1938064 |
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| Gene Length | 3132 bp |
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| Protein Length | 1043 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641296823 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001562770 |
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| Protein GI | 160897188 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.415877 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACT GGGTCGTTAG AAATAGCCTC CACAACCGGC TGTTCGTACT GGTCTTTGCG
GCCATTTTGC TGGTCTATGG AGCCATTACC GCTTGGCGCA CGCCGGTGGA TGTGTTCCCG
GACCTCAATA AGCCGCTTGT CACCGTCCTC ACCGAGGCCG GCGGCATGGC CCCTGAAGAA
GTGGAGCAAC TCGTCACCTT TCCGTTGGAG ACGGCGCTCA ACGGGATGCC CGGCGTGACA
CGGGTTCGCT CCATGTCCGG AGTGGGTCTG TCCATCGTCT ACGCAGAGTT CGACTGGGGC
ACCGACGTAT ACCGCAACCG ACAGTTGGTA TCGGAGAGAC TTTCACTCGC TCGCGAGCGA
CTCCCTGCCG ACGTCAATCC GATGATGGGG CCAGTCTCAT CCATCATGGG CGAAATCATG
CTGCTCGCGC TTCCGCTGCA GGGCACTGAG GGAGGAACGG CCACGCCGAT GGAGGCACGG
GAGTACGCCG ACTTTGTGCT GCGACCACGG CTGTTGTCGA TTCCTGGCAT CTCACAGGTG
ATCCCCATCG GGGGCGATGT ACGTCAGCTC CGGGTCGAGC CCGACACCGC AAGGATGGCG
CAGTTTGGAG TGTCGCTCAC GGAGGTCGAG GACGCCTTGC GCGGGTTCTC GTCCAATGCG
GGGGGCGGCT TTATCGACCT GAACAGTCGT GAGTTCCTCA TTCGGCATGT AGGACGAACG
AACCGTGTTG AAGACTTGCA GGGCATTGCT GTTGCATGGA GAAACGGTCG CTCCATTCTC
TTGGAGCAGG TTGCACAGGT CTCCTTTGCC GCTGGTATGA AACGTGGTGA TGGCGGCTAC
AACGGCGCGC CTGCTGTGGT CGTCAGTGTG CAAAAGCAAC CTGCGGGCGA CACAGTCGTT
CTGACGCAAG CCATCGAGTC GGCTTTGGAA GAGCTCAAGC AAGGCCGCCC AGCTGGCCTG
CAAGAGCCGC GTGTGTTGTT CAAGCAGGCG GATTTCATCA AGGCGTCCGT GGGGAACGTC
AGTGAAGCGC TCCGTGACGG CGCCATCATG GTAGCCATCG TGCTCTTTGC GTTCCTGCTA
TCAGCGCGGA CCACACTTAT CTCCCTCGTC GCCATCCCGC TCTCGCTGGC GGTGACGGCG
GTAGTCTTCA AGCTGCTCGG ACAGTCCATC AATGTGATGA CATTGGGAGG CCTGGCCATC
GCCATTGGCG AGCTGGTCGA CGATGCTGTC GTGGACGTGG AAAACATCCT GCGACGGCTG
AAGCAGAACC GCCAGTTGCC CAGGCCACTG TCGACCATGG AGGTGGTACG CCACGCCAGT
ATCGAAGTGC GCTCAGGCAT CGTTTACGCC ACCATCATCG TGTGTCTGGT GTTCGTTCCT
CTGTTCGCTC TTCCCGGCAT CGAAGGGCGG CTCTTCACAC CGCTGGGCAT TGCCTACATC
GTCTCCATCC TGGCATCGAT GCTGGTGTCC ATGACCGTCA CGCCGGTGAT GAGCTCCTAC
CTGCTGCCAA AGATGCGCCG TATTGACCAT GGTGACAGCA CATTGGTCAC GCATTTGAAG
CGCTGGGATG AGGCGCTGCT GAGCTGGTCC TTTCCGCGCA CCAAGATACT GCTTTGCGCG
GCAGCTTTGG CCGTTGCCGG TGCAGCAGCG AGCGTGCCAT TCTTCCCGAG GGCGTTTCTG
CCGGCTTTCA ACGAAGGCTC CCTGGTTCTC GGAATGGTCT TCAACCCCGG GACATCACTG
GCAGAGGCTA ACCGGATGGG CTCACTGGCT GAAACACTCA TCAAGGAGGT TCCAGAGGTA
ACGCAGGTGG GGCGTCGTAC CGGACGTGCG GAGCTGGACG AGCATGCGGA GGGTGTGCAC
TCTGCAGAAA TCGATGTCGA CCTTCGCCGT AGTCAGCGGG ACCGAGAAGC CATCATGGCT
GACATCCGCG GCAAGCTTTC CGTCTTGCCC GCGCAAGTTG CCGTTGGCCA GCCCATCTCA
CACCGGTTGG ACCATCTCTT GTCGGGCGTT CGCGCGCAGA TTGCAGTCAA AGTTTTCGGT
GACGACACTG ACACCCTACG TGGTTTGGCG GAGCAACTAC GCCTGGGGAT GTCGACCATT
CCTGGCGTGG TGGACTTGTC TGTTGAGAAA CAGGTGCTTA TTCCCCAAAT CACGGTGCGC
ATCGACCAGC GCAAGGCAGC GCAGGCAGGC ATCTCTCCCG GGGAAGCCGT CCGTATCCTC
CAAGCCCTGA CAGATGGAGC ACACAGCGCG CAAATTGTCG ATGGCGTAAA GCGGTACGAG
TTGGTGCTGC GTTTGCCAGA TGGGGCTCGA ACGCCCCAGG ACCTGGAGCG TACCCTCATC
GATACTCCGT CGGGACGTAT CCCTGTGTCT TCCATCGCGA CGGTCGAGCA GAACGACGGC
CCAAACCAGA TTGGCAGGGA GAACGGGAGG CGCCGCATTG TTGTCTACGC GAACACGGAT
GGCAACGATA TGAGCTCCAT CGTGAGCAAT ATCCGGAGCG TGATTGGCGG GGTGACGCTG
CCGGCTGGCG CGTTCATCAG CCTTGAGGGA CAGTTCCAAG CTCAGGAGCA GGCCGCGCAA
CTGATTGCCA GTCTATCCGT GCTGTCCCTG TTGCTGGTGT TCCTGGTCCT GTACTCCCGG
TACAAGTCTG TCACGCTGGC GGCCATCATC ATGGCGAACA TCCCCCTCGC CTTGATAGGC
AGTGTGGTCG CCATGTGGAT TGGAGACATC AGCCTCTCTG TTGCCTCAAT GGTGGGCTTC
ATCACGCTGG CCGGCATCGC GACGCGCAAC GGCATCCTCA AGGTCAGCCA TTACATCAAC
CTCTGCAAGT TCGAGGGGGA GACGTTTGAC CAGGCCATGG TTGTACGCGG CTCACTGGAA
CGATTGACTC CAGTCCTGAT GACTGCGCTC GTTGCCGCGT TTGCTCTGAC TCCTTTGCTG
CTGTCTGCCG ACGCACCCGG CAAGGAAATT CTGCACCCAG TGGCTGTCGT CATCTTCGGC
GGTTTGGTGA GTTCAACGCT ACTCGACACA TTGATGACAC CGCTGATGTA CCTGCGGTTC
GGTCGCAAGG CGACAGAGCG TCTCATCACC GACCAACCGG AAGAATCTCA CGACGTTCAA
CACGCGTACT GA
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| Protein sequence | MFNWVVRNSL HNRLFVLVFA AILLVYGAIT AWRTPVDVFP DLNKPLVTVL TEAGGMAPEE
VEQLVTFPLE TALNGMPGVT RVRSMSGVGL SIVYAEFDWG TDVYRNRQLV SERLSLARER
LPADVNPMMG PVSSIMGEIM LLALPLQGTE GGTATPMEAR EYADFVLRPR LLSIPGISQV
IPIGGDVRQL RVEPDTARMA QFGVSLTEVE DALRGFSSNA GGGFIDLNSR EFLIRHVGRT
NRVEDLQGIA VAWRNGRSIL LEQVAQVSFA AGMKRGDGGY NGAPAVVVSV QKQPAGDTVV
LTQAIESALE ELKQGRPAGL QEPRVLFKQA DFIKASVGNV SEALRDGAIM VAIVLFAFLL
SARTTLISLV AIPLSLAVTA VVFKLLGQSI NVMTLGGLAI AIGELVDDAV VDVENILRRL
KQNRQLPRPL STMEVVRHAS IEVRSGIVYA TIIVCLVFVP LFALPGIEGR LFTPLGIAYI
VSILASMLVS MTVTPVMSSY LLPKMRRIDH GDSTLVTHLK RWDEALLSWS FPRTKILLCA
AALAVAGAAA SVPFFPRAFL PAFNEGSLVL GMVFNPGTSL AEANRMGSLA ETLIKEVPEV
TQVGRRTGRA ELDEHAEGVH SAEIDVDLRR SQRDREAIMA DIRGKLSVLP AQVAVGQPIS
HRLDHLLSGV RAQIAVKVFG DDTDTLRGLA EQLRLGMSTI PGVVDLSVEK QVLIPQITVR
IDQRKAAQAG ISPGEAVRIL QALTDGAHSA QIVDGVKRYE LVLRLPDGAR TPQDLERTLI
DTPSGRIPVS SIATVEQNDG PNQIGRENGR RRIVVYANTD GNDMSSIVSN IRSVIGGVTL
PAGAFISLEG QFQAQEQAAQ LIASLSVLSL LLVFLVLYSR YKSVTLAAII MANIPLALIG
SVVAMWIGDI SLSVASMVGF ITLAGIATRN GILKVSHYIN LCKFEGETFD QAMVVRGSLE
RLTPVLMTAL VAAFALTPLL LSADAPGKEI LHPVAVVIFG GLVSSTLLDT LMTPLMYLRF
GRKATERLIT DQPEESHDVQ HAY
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