Gene Daci_1732 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1732 
Symbol 
ID5747290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1925073 
End bp1926368 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content64% 
IMG OID641296813 
Productchloride channel core 
Protein accessionYP_001562760 
Protein GI160897178 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.345232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAT TCCCCCATTT CGAACAGCTT GAACTGCTTC CCTATCTGGG CAAGTGGTTC 
ATCTTCGCCA CCCTCGTGGC GGCCCTGGCC GGCACCGCTT CCGCGTTCTT CTTGCTGTCC
CTGGACCTGG CGACGGCCTG GCGTGAGGCC CATCCCTGGA TCATCTGGCT GCTGCCCTTC
GCAGGCATGG CAGTGGGCCT CGTTTACTTC CTGTTGGGCA AGCGGGTGGA CGGCGGCAAC
AACCTGTTGA TCGAAGAGAT TCACGACCCC AAGCAGGTGG TGCCGTTACG CATGGTGCCG
CTGGTACTGG GCGGCACCGT CATATCCCAT CTGTTCGGCG CATCAGTCGG GCGCGAGGGC
ACCGCCGTGC AGATGGGGGG CGCTCTGGCC GACCAGCTGA CGCATGTTTT CCGACTCCAC
CAAGACGATC GCCGCGTGCT GCTGATGAGC GGAATCAGCG CCGGCTTCGC TTCGGTCTTC
GGCACGCCGC TGGCCGGGGC AGTCTTCGGT CTGGAGGTGC TGGCCATCGG CCGTATGCGC
TACGACGCGC TGTTTCCCTG CATCGTGGCA GCCTTCGTAG CCGATCAGGT CTGCACCGCC
TGGGGAGTCC ACCACACCCA CTACGCCATG AGCGCCGTGA ACAATATCGA TGCTTGGAGT
GTGGTCGCCG TCATCATCGC CGGCATTCTC TTTGGCCTGG TCGGAATGCT CTTTGCCACC
GCCGTGCACA AGATCGGCGC GCTGGTCAAA CACCTGATCG CATACCCGCC ACTGCGGCCT
TTCTTCGGCG GCCTCGTCAT CGCCACGGCG GTTTGGGCGC TCGACGCCTA CCGCTACATC
GGCCTGGGTA TTCCGGACAT CGCTCGCTCC TTCCAAGAGC CCATGCTGCC ATGGGACTTC
TTGGGCAAGC TGGTGTTCAC GGTCGCCTCG CTGGGGACGG GCTTCAAGGG CGGCGAGGTG
ACACCGCTGT TTTACATCGG TGCGACCATG GGCAACGTCC TGGCGCCTTT GCTGCATATG
CCGTTCGCGC TCATGGCCGC CATCGGCTTT GTTGCAGTAT TCGCGGGGGC GGCGAACACG
CCCATTGCTA CTACCTTGAT GGCGATGGAG CTGTTCGGCG CTGGCATCGG ACCACTGGCG
GCTATCGGCT GCGTCACCGC CTACCTGTTC TCCGGGCATG CAGGCATCTA CCACGCCCAG
CGCATTGGCC ACAGCAAGCA CCACAGGCGC AGCCTGACCG GGGCCGAAGT TCCACGCCGC
GATGTGGAGG CAACCAAGAC CAAGGATCCA GCATGA
 
Protein sequence
MRKFPHFEQL ELLPYLGKWF IFATLVAALA GTASAFFLLS LDLATAWREA HPWIIWLLPF 
AGMAVGLVYF LLGKRVDGGN NLLIEEIHDP KQVVPLRMVP LVLGGTVISH LFGASVGREG
TAVQMGGALA DQLTHVFRLH QDDRRVLLMS GISAGFASVF GTPLAGAVFG LEVLAIGRMR
YDALFPCIVA AFVADQVCTA WGVHHTHYAM SAVNNIDAWS VVAVIIAGIL FGLVGMLFAT
AVHKIGALVK HLIAYPPLRP FFGGLVIATA VWALDAYRYI GLGIPDIARS FQEPMLPWDF
LGKLVFTVAS LGTGFKGGEV TPLFYIGATM GNVLAPLLHM PFALMAAIGF VAVFAGAANT
PIATTLMAME LFGAGIGPLA AIGCVTAYLF SGHAGIYHAQ RIGHSKHHRR SLTGAEVPRR
DVEATKTKDP A