Gene Daci_1722 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1722 
Symbol 
ID5747280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1917869 
End bp1918630 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content46% 
IMG OID641296803 
Producthypothetical protein 
Protein accessionYP_001562750 
Protein GI160897168 
COG category[R] General function prediction only 
COG ID[COG3907] PAP2 (acid phosphatase) superfamily protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.239602 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCAAG AACAATTGGG AAATTATATA GATTCCCAGC GACACCAGTT TCTGATCACC 
CATATCTTCA CACCATTCCT CCCAATAATT GCTATGTCAT ATGTGCTCAT GGCAGGAGGA
GGTGATCAAT GGCTTGCTGA TTCTATATAC GGAATGCAAG GCCATGAATG GAGGTTTGTC
GATAACTGGC TCGCGTCAAC AATACTTCAT CGAGGTGGAA AGATTGCAAG CATCCTTGCA
GCAATAACAG TTTTCTGCCT CTACACTATA TCTTTTCTTA AATGTGCGCC ATACATTCGG
TTGTGGAGAA CGCCATTGTG CTATTTGCTG CTTACCATAA TAGCGAGTGT GGTAGCAATA
AGCTTATTAA AATCACTAAC TAACATGGAC TGCCCTTGGA GCCTGGTGGA CTACGGAGGG
GATCGCCCAT TTGTAGGGCT ATTTGAGACC AGGCCCTCAG GCCTCGGGCG AGGAAAATGC
TTTCCTGCCG GGCATGCTAG TGCTGGATAT GCATGGATTA GTCTCTATTT TTTCTACCTA
ATGGTTAAAC CATCGTACCG ATGGCTGGGC CTCGCCATTG GAATATTGTC CGGATTGATC
TTTGGCCTGA CGCAGCAGTT TCGAGGCGCT CATTTTGCAT CCCATGACCT CTGGTCTTTA
GCAATCTGCT GGTACATATC AGCACTGATG TACACCTTCT TCTCAAAATT TGAATCTCAC
CCCCGCAGCC ACTATTGTGA AAAACAACTC TACCAAGCCT AA
 
Protein sequence
MFQEQLGNYI DSQRHQFLIT HIFTPFLPII AMSYVLMAGG GDQWLADSIY GMQGHEWRFV 
DNWLASTILH RGGKIASILA AITVFCLYTI SFLKCAPYIR LWRTPLCYLL LTIIASVVAI
SLLKSLTNMD CPWSLVDYGG DRPFVGLFET RPSGLGRGKC FPAGHASAGY AWISLYFFYL
MVKPSYRWLG LAIGILSGLI FGLTQQFRGA HFASHDLWSL AICWYISALM YTFFSKFESH
PRSHYCEKQL YQA