Gene Daci_1719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1719 
Symbol 
ID5747277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1914538 
End bp1914927 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content42% 
IMG OID641296800 
Productflagellar basal-body rod protein FlgB 
Protein accessionYP_001562747 
Protein GI160897165 
COG category[N] Cell motility 
COG ID[COG1815] Flagellar basal body protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.292861 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAG TTCGTTTTGA AGATATAGCT CTAAAGATAA GAACTCAAAG ACTTGCGATT 
ATTGCAAGTA ATATAGCCAA CGCAGATACA CCTGGGTACC AGGCAAAGGA CCTTGATTTC
AAAGAAGCAC TTGAACGGAG CAACGCAACA ATGCTGTCCG TTAGTAGCAC CAGCAAGGGT
CACATTCCCA GCTCTGAGAT GAAATCTATT TATGACACAC AAGTCGCCTT CCGTCCGGCA
TCACAAAATT CTCTCGACAG AAATACTGTC GACTTAGACC AAGAAAGAGC CAGCTTTATT
GACAATGCAA TTCGGACAGA GCTTGCAATG AAACAAGCGG TAGAAGAGTA TTCTGAAATT
GGCGATATGC TAGCCAAAAT GATTAAATAA
 
Protein sequence
MSEVRFEDIA LKIRTQRLAI IASNIANADT PGYQAKDLDF KEALERSNAT MLSVSSTSKG 
HIPSSEMKSI YDTQVAFRPA SQNSLDRNTV DLDQERASFI DNAIRTELAM KQAVEEYSEI
GDMLAKMIK