| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1715 |
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| Symbol | |
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| ID | 5747273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | + |
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| Start bp | 1907453 |
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| End bp | 1908823 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641296796 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001562743 |
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| Protein GI | 160897161 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR00999] Membrane Fusion Protein cluster 2 (function with RND porters)
[TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.542005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA ACTCTTCTTC AAGTTCTAGC CGTACGCCAA CCGTCATAGC GATTGTGAGC
ATCCTGTCTG TAGGGGTTCT CGCAGCGACT CTGATTTTGC GATCAGGCAA CTCCAACTCC
CCCGAATCCA GCGGAAAGAC CCCCCAGTCC CAGGAGCATG GTCATGGTGA GGCCGCAGGC
CATGCTGATC AAGAACATCA TGGGGAGAAG GCTGCCAAGT CCCACAGCGA TGACAAGGGC
CATGCTGATG GTGAGCATCA TGAAGAGGGC GATGGCAACA AGGCCAAGCC AGAAGCTTCC
GCCAAGCCCG GCGCCGAAGC TGGTCATGAC GAAGATGAAG GATTGATCCC GATGGATGCC
CAACGCATCC AGGTTGCCGG CCTCAAGGCC GCTCAAGCTG GACCATCGGT TATCCGTAGC
GTGCTGCAAC TGCCTGGAGA GATTCGCTTT AACGAAGACC GCACCGCTCA CGTGGTACCC
CGCGTTGCCG GCGTCGCGGA AAGCGTGCCA GCCAACTTAG GTCAAAACGT TAAGAAGGGC
CAGCTGCTGG CTGTTCTGAG CAGCGTTGCA GTGTCGGAGC AGCGCAGCGA ACTGTTGGGC
GCGCAAAAGC GTTTGGCACT CGCCCGAACC ACCTATCAGC GTGAAAAGCA GCTTTGGGAG
GAAAAGGTTT CGGCGGAGCA GGACTATCTG CAGGCCCAAC AGGTACTACG CGAAGCTGAG
ATCGCGGTCT CCAACGCTCA GCAAAAGTTG GCAGCTACTG GTGCAGGCGC TGGCGCGGGC
GCAGGGCTCA ATCGCTTCGA ACTACGGGCA CCATTTGACG GTGTGATCGT GGAGAAGCAC
CTGTCTATCG GTGAGGCCGT TCAGGACACC ACGCAAGTCT TCACGATCTC CGACCTTCGT
TCTGTGTGGG CCGAGATGAG AGTCTCCGCC CCCGATCTGC CCTCAGTGCG TGTTGGCGAA
AAGGCAACGG TTCGCGCGAC AGCATTTGAA TCTGCAGCGA CGGGCGAAGT CTCCTATGTC
GGCGCGCTCA TCGGACAGGA CACGCGAACT GCCCCAGCCC GTATCACCTT GCCGAACCCA
GACGGTGCCT GGCGCCCAGG TCTGTTTGTG AATGTGGAGG TCACAGCATC CTCGCAGGAA
GCCGCGCTCA CCGTTGTGTC CACCGCAATT CAGCGCATCG AAAACCAAAA GACAGTGGTG
TTCGTTCCAG TGCAAGGCGG CTTCCGGGCA CAGCCGGTTC GAATCGGACG TACGGACTCC
AAAAATACGG AAATCTTGGA AGGCCTCAAG CCTGGCCAAG CGTACGTGGC CGAAGGGAGT
TTCCTCCTGA AGGCGGAGCT CGGCAAAGCC ACGGCTGAAC ATGCTCATTG A
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| Protein sequence | MKTNSSSSSS RTPTVIAIVS ILSVGVLAAT LILRSGNSNS PESSGKTPQS QEHGHGEAAG
HADQEHHGEK AAKSHSDDKG HADGEHHEEG DGNKAKPEAS AKPGAEAGHD EDEGLIPMDA
QRIQVAGLKA AQAGPSVIRS VLQLPGEIRF NEDRTAHVVP RVAGVAESVP ANLGQNVKKG
QLLAVLSSVA VSEQRSELLG AQKRLALART TYQREKQLWE EKVSAEQDYL QAQQVLREAE
IAVSNAQQKL AATGAGAGAG AGLNRFELRA PFDGVIVEKH LSIGEAVQDT TQVFTISDLR
SVWAEMRVSA PDLPSVRVGE KATVRATAFE SAATGEVSYV GALIGQDTRT APARITLPNP
DGAWRPGLFV NVEVTASSQE AALTVVSTAI QRIENQKTVV FVPVQGGFRA QPVRIGRTDS
KNTEILEGLK PGQAYVAEGS FLLKAELGKA TAEHAH
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