| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_1713 |
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| Symbol | |
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| ID | 5747271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 1905266 |
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| End bp | 1905949 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641296794 |
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| Product | two component heavy metal response transcriptional regulator |
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| Protein accession | YP_001562741 |
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| Protein GI | 160897159 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR01387] heavy metal response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.535279 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAATCC TAATAATTGA GGATGATGAA AAGTTGGTAG ACCAGCTTGT CAGAGGGTTG
GACGACGAAG GGTTTACTGT AGATTTTGCA CTTGATGGGA TCTCAGGACT AAATAAGGCG
GCTACCCAGG ATTTCGATGT AATTATTCTT GATGGCATGC TTCCTGGAAT AGATGGCCTT
GCTGTTTTAG CGGCTTTGAG ACAGTCAAAG CAAACAGCTG TTTTGATGCT CACTGCAAGA
GATTCAGTTG AAGACAGAGT GACCGGCTTG AAAAGCGGTG CTGATGACTA TATGGTCAAG
CCGTTTGCAT TTTCCGAATT GGTCGCAAGA ATAAAGGTAT TGCTCCGCAG GAATCCTTCA
TTGAGCAGTG CGGTGAATGT TGCGACAATA TTGAGAATGC ACGACTTGGA AATAGATCTT
GCAAGGCAGC GTGCCTTTCG TGCGGGGAAA AAACTCGATC TAAGTGCGAA AGAGTATAGC
TTGCTGATAT TGTTGATACG TAGACAAGGA GAGGTGATTT CTCGAGCTGA GCTAGCCTCT
CAGGTCTGGT CAATAAATTT TGAGTCAGAG TCAAATGTCG TTGAGGTGGC CATTAGAAGG
CTAAGAATGA AAATCGATGA GCCGTTCGAT AAGCCATTGC TGCACACCAT TCGCGGAATG
GGCTACATTT TGGAATCAAG ATGA
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| Protein sequence | MRILIIEDDE KLVDQLVRGL DDEGFTVDFA LDGISGLNKA ATQDFDVIIL DGMLPGIDGL
AVLAALRQSK QTAVLMLTAR DSVEDRVTGL KSGADDYMVK PFAFSELVAR IKVLLRRNPS
LSSAVNVATI LRMHDLEIDL ARQRAFRAGK KLDLSAKEYS LLILLIRRQG EVISRAELAS
QVWSINFESE SNVVEVAIRR LRMKIDEPFD KPLLHTIRGM GYILESR
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